Shewanella youngdeokensis: RGE70_03625
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Entry
RGE70_03625 CDS
T10660
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00550
Peptidoglycan biosynthesis
syou01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGE70_03625
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
syou01002
]
RGE70_03625
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syou01011
]
RGE70_03625
Enzymes [BR:
syou01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RGE70_03625
Peptidases and inhibitors [BR:
syou01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RGE70_03625
Peptidoglycan biosynthesis and degradation proteins [BR:
syou01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RGE70_03625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WOT05923
UniProt:
A0ABZ0K0G8
LinkDB
All DBs
Position
complement(847729..848901)
Genome browser
AA seq
390 aa
AA seq
DB search
MNLLNQTIKTLLLATSVAALSAQAAPVMTPNAPTVAAKAYVLLDYNTGQIIAENNAYESL
NPASLTKMMTSYVIGHEIKVGNISPSDEVTISENAWSKNFPDSSKMFIEVGKTVSVEELN
KGIIIQSGNDACVAMAEHIAGTEDGFVDLMNSWAKQLSMQDSYFENSHGLDSDNHKTTAY
DMAILGAAIIRDVPEEYAVYKEKSFTYNGIKQYNRNGLLWDKSLSVDGIKTGHTSGAGYN
LVTSATKDSMRLISVVMGTKSESARKAESKKLLNYGFRFFETVTPYQAGDSFVTQQIWFG
DRDTIDLGVTTDTPITISRGQAKNLQANFELTKELKAPMAKGETVGRIYFQLNGKDIAQF
PLVTLQEINEGSWFSQLMDYFKQMFAGWFS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattaaaccaaacaataaaaacgcttttgctagcgacctcagtcgccgcctta
tctgcacaagcagctcctgtaatgacacctaatgcaccgactgtggcagccaaagcctat
gtgctacttgactacaacacaggccaaattattgctgaaaacaacgcatatgaaagcctc
aaccctgctagtttgaccaaaatgatgaccagttatgtaattggtcatgaaattaaagtc
ggtaatatttcaccatctgatgaagtcactattagcgaaaacgcctggtctaaaaacttc
cccgactcttcaaaaatgtttattgaagtcggcaaaacagtgtcagttgaagagcttaac
aaagggattatcattcaatcaggtaatgatgcgtgtgttgctatggctgagcatattgcc
ggtaccgaggatggctttgttgacctgatgaactcgtgggccaaacagttaagcatgcaa
gacagttactttgaaaactcacacggtcttgattcagataaccacaaaaccaccgcttat
gatatggcgatccttggcgctgcaatcatccgtgacgtgcctgaagagtacgcggtttac
aaagaaaaatcatttacttataacggcataaaacaatacaaccgtaacggactattgtgg
gataaaagcttaagcgttgacggcataaaaaccggccacacatctggcgcaggctacaac
cttgtcacctctgcaactaaagacagcatgcgtttaatttcagtagtgatgggtactaag
agcgaatcagcccgtaaagctgaaagcaaaaaactactcaactatggcttccgctttttc
gaaaccgtcacaccgtatcaagcgggtgatagttttgtaacgcagcaaatctggtttggc
gatagagacaccatcgatttaggtgtaaccactgatacaccaattaccattagtcgtggt
caagctaaaaacctccaagctaattttgagctcaccaaagagctaaaagcaccgatggca
aaaggcgaaacggtaggccgtatatacttccaactaaacggaaaagatatagcgcagttc
ccgttagtcacgctgcaagaaatcaacgaaggcagctggtttagccaactgatggattac
ttcaagcaaatgtttgctggctggtttagctaa
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