Shewanella youngdeokensis: RGE70_03705
Help
Entry
RGE70_03705 CDS
T10660
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syou03016
]
RGE70_03705 (miaB)
Enzymes [BR:
syou01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RGE70_03705 (miaB)
Transfer RNA biogenesis [BR:
syou03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RGE70_03705 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Amdase
Motif
Other DBs
NCBI-ProteinID:
WOT05937
LinkDB
All DBs
Position
complement(864770..866197)
Genome browser
AA seq
475 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLLDEYEGYTLTDSAEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGLIIGVGGCVASQEGKAIKERAQCVDLIFGPQTLHRLPEMIDQIKD
GKKAVIDVSFPEIEKFDSLPEPRADGPSAYVSIMEGCSKYCSFCVVPYTRGEEVSRPLDD
IILEIAQLAAQGVREVNLLGQNVNAYRGATHDDEICTFAELLRYVAAIDGIDRLRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRLRKARPDI
LISSDFIIGFPGESKQDFADTMKLIEEIQFDHSFSFIYSARPGTPAADLPDDVSLEEKKE
RLAILQDRITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTENSRVVNFEGKPEHIG
GFVDVEIVDVYTNSLRGVFVRAEDEMDLRRDLRPSDIMAKYKHDDALGVTQFTPS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaactccatattaaaacttggggctgtcaaatgaatgagtacgactcatca
aagatggctgaccttctcgacgaatacgagggctacacgctaacagacagtgctgaagaa
gccgacgtgttgttgttaaacacctgctctattcgtgagaaagcacaagaaaaagttttt
catcagcttgggcgctggaaaacattaaaagataaaaaaccaggactaattattggtgtt
ggtggttgcgttgcctcacaagaaggtaaagcgattaaagaacgcgctcagtgcgttgat
ctcatttttggcccgcaaacattgcatcgcctgcctgaaatgattgaccaaatcaaagac
ggtaaaaaagcagtaatcgacgttagtttccctgaaattgaaaagttcgatagcctacct
gagccacgtgctgacggccctagcgcttatgtatcaatcatggaaggctgcagtaaatac
tgctctttttgtgtggtaccttatacacgcggtgaagaagttagccgtccattggacgat
attattcttgaaattgcccaattggcggctcaaggtgttcgtgaagtcaacctgctaggt
caaaacgttaacgcatatcgcggcgcaacacacgatgatgaaatctgtacttttgcagaa
ctattacgttacgttgccgcaattgatggtattgaccgcttacgctttaccaccagccac
ccaattgagttcacacaagacatcattgatgtttatgaagatacccctgaattggtcagc
tttttacatctgccagttcaatctggttcagatttaattctaacgcagatgaaacgtggc
catatggcaatcgaatataagtctattattcgccgcctacgtaaagcgcgtccagatatc
cttataagctctgactttatcattggcttccctggtgaatctaagcaagactttgctgac
accatgaaactgattgaagaaattcaatttgaccatagctttagttttatctacagcgca
cgtcctggtactccggctgccgatttacctgatgatgttagcctggaagagaaaaaagag
cgcttagctattttacaagaccgcattactcagcaagccatgcgttatagccgccaaatg
cttggtacggttcagcgtattttagttgaaggcccatcggttaagaacccaatggaactt
cgcggccgaactgaaaacagccgtgtagtaaattttgaaggtaaacctgagcacattggc
ggttttgttgacgttgaaattgtagacgtatacaccaactctttacgcggagtatttgta
cgcgcagaagatgaaatggatttacgtcgcgatctacgtccgtcagacatcatggcaaaa
tacaaacacgatgatgcactaggtgtaacacagtttactccttcttaa
DBGET
integrated database retrieval system
