Shewanella youngdeokensis: RGE70_03815
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Entry
RGE70_03815 CDS
T10660
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00541
Biosynthesis of various nucleotide sugars
syou01100
Metabolic pathways
syou01250
Biosynthesis of nucleotide sugars
Module
syou_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RGE70_03815 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
syou01005
]
RGE70_03815 (kdsA)
Enzymes [BR:
syou01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RGE70_03815 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
syou01005
]
Lipid A
RGE70_03815 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WOT05951
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Position
882013..882861
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AA seq
282 aa
AA seq
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MSNKTINLGSIEIANDKPFVLFGGMNVLESRDLAMKIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKSTFNLPLITDVHEIHQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIVTKFNEAGNDEIILCERGSSFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQKPGGRSDSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLVQMKAVDDLVKSFAPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaaaccattaatttaggttcgattgaaatcgcaaatgacaaaccttttgtg
ttatttggtggtatgaatgtgcttgagtcacgcgaccttgcaatgaaaattgctgaaacg
tacgctgaagtgacgcaaaagctcgggatcccttacgtctttaaagcgtcatttgataag
gcgaaccgctcttctgttaactcttaccgtggtccaggtatggaagaaggtttaaagatt
tttgaagagataaaatcaacctttaacctgcctttgatcaccgatgtacatgaaatacac
cagtgtgctccagttgctgaagtggttgatattattcaactgccagcatttctagcgcgc
caaaccgacttggttgtggccatggctaaaacgggcgcgataattaacgttaaaaaaccg
caatttttagcaccacatgaaatgcgccatatcgtgactaagtttaacgaggcgggtaat
gatgagattattttatgtgaacgtggttcaagctttggttataacaacttagtggttgat
atgctgggtatggatgaaatgaagcaatctggctacccagttatatttgatgcgacgcat
gcattacaaaaaccgggtggacgtagcgacagtgccggtggacgccgcgcacaagctaca
gagcttgcccgcagtggtatggcattaggtttagcggggttgttcattgaagcgcatccc
gatcctgacaatgcaaaatgtgacgggccatgtgcgttaccattgcatcagttagaaaat
tacttagtacaaatgaaagccgtagacgacttggttaagtcatttgcgccaatcgatact
agcaagtaa
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