Shewanella youngdeokensis: RGE70_04085
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Entry
RGE70_04085 CDS
T10660
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_04085 (rlmE)
Enzymes [BR:
syou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
RGE70_04085 (rlmE)
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RGE70_04085 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WOT06000
LinkDB
All DBs
Position
944497..945126
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AA seq
209 aa
AA seq
DB search
MSGKKRTASSSRWMQEHFDDHYVKLAQKRGFRSRAAFKIEEIQEKDKLIRSGMTVVDLGA
APGGWSQVAVKLAGDQGKVIACDILPMDPIVGVDFLQGDFREEKVLDALLTRVGDAKVDV
VLSDMAPNMSGSGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFDEYMKAVKQ
AFKTVKTRKPDSSRARSREVYLVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaaaaaacgaacagcgagttcttctcgctggatgcaagaacatttcgacgat
cactatgttaaactcgcgcaaaaacgtgggtttaggtcacgtgcggcctttaagatagag
gagatccaagagaaagataaactgattcgttcaggtatgactgtagttgatttaggtgca
gcacctggtggatggtcacaagttgcggtgaagcttgctggagatcaaggcaaagtgata
gcgtgcgacattctacctatggatccaatcgttggtgtcgacttcctacaaggcgacttt
cgcgaagaaaaagtgcttgatgcactcttaactcgtgtaggtgatgctaaagtcgatgtt
gtattatctgacatggcccctaacatgagtggtagcggcggggttgatcagcctcgtgca
atgtatttagtggaacttgctttagatatgtgtcatcaagttttggcacctaatggttgt
ttcgccgtgaaagtttttcagggggagggctttgacgaatacatgaaagcagtaaaacaa
gcatttaaaacagttaaaacacgtaagccagattcatcgcgagcaagatcgcgtgaagtc
tatcttgtggcgactgggtacaagttatag
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