Shewanella youngdeokensis: RGE70_04195
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Entry
RGE70_04195 CDS
T10660
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00240
Pyrimidine metabolism
syou01100
Metabolic pathways
syou01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RGE70_04195 (deoA)
Enzymes [BR:
syou01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
RGE70_04195 (deoA)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
WOT06020
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Position
970904..972235
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AA seq
443 aa
AA seq
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MFLAQEIIRKKRNAETLSTEEIQFFVNGITNNTVSEGQIAALGMAVYFNDMNMDERIALT
TSMRDSGTVLNWQTLDLNGPIIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHT
GGTLDKFDAIPGYNTEPDSALFRKVVKDAGVAIIGQTGDLVPADKRFYSIRDNTATVESI
SLITASILSKKLAAGLDALAMDVKVGTGAFMPTYEASEELARSITAVANGAGTKTTALLT
DMNQVLASCAGNAVEVKEAIDFLTGAYRNPRLYEVTMGLCAEMLILGGIASNEVEARAKL
NAVLDNGKAAEVFGRMVSGLGGPADFVERYSTYLPDSKIIRPVYADQAGFATGMDTRELG
LAVVTLGGGRRKPGDALDYSVGLTKMCALGDEVSADKPIAFIHAQSEDAFAEAQAAVKKA
IHIGDSKPDKNPEIYRYIRESDL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagctcaagaaattattcgaaaaaaacgtaatgctgaaaccctttctacagaa
gagatccaattcttcgttaacggcatcactaacaacacggtttcagaaggccaaattgcg
gcgctgggcatggcggtttattttaacgacatgaatatggatgaacgtattgcgctgacc
acatcaatgcgtgattctggcaccgttttaaattggcaaacccttgaccttaatggtcct
attattgataagcactcaaccggtggtgtgggggatgtcattagtttgatgttgggccca
atggctgctgcttgtggtggttatgtgccgatgatctctggccgtggcttgggtcatacc
ggcggcacgcttgataaatttgatgctattccaggctataacacagagcctgatagcgca
ttgtttcgtaaagtagtcaaagacgctggcgtggcaattattggccaaacgggcgatctt
gttcctgccgataaacgtttctattcgattcgtgataataccgctacagtcgaatctatt
tcactcatcacagcttctattttgtctaaaaagcttgcagcaggtcttgatgccttggct
atggacgtcaaagttggtacgggtgcgtttatgccgacctacgaagcctctgaagagcta
gcacgcagcattactgcggtagctaatggtgctggcacaaagaccaccgcattattaacc
gatatgaaccaagtattggcttcatgtgcaggtaatgccgttgaagtaaaagaagcgatc
gactttttaacaggtgcataccgtaacccgcgtctttacgaagtcaccatggggctttgt
gctgaaatgttgattctaggtggcattgccagcaatgaagttgaggctcgtgctaaactt
aatgcagtgcttgataacggtaaagcggcagaggtgtttggtcgaatggtttcaggcctt
ggtggccctgctgattttgtcgagcgttacagtacctatttaccagattcaaaaataatt
cgtccagtttatgcagaccaagcaggttttgcgacaggcatggatacccgtgagcttggg
cttgccgttgtcactttaggtggcgggcgtcgcaagcctggtgacgcgcttgattacagt
gtcggactcactaaaatgtgcgcgctgggtgatgaagttagcgccgataagcccattgca
tttattcatgctcaatctgaagatgcctttgctgaagcacaagctgcagtaaaaaaagca
attcacattggcgatagtaaaccagacaaaaatccagagatataccgctatattcgcgag
tcagatctctaa
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