Shewanella youngdeokensis: RGE70_04360
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Entry
RGE70_04360 CDS
T10660
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00900
Terpenoid backbone biosynthesis
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RGE70_04360 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
syou01006
]
RGE70_04360 (ispA)
Enzymes [BR:
syou01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RGE70_04360 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RGE70_04360 (ispA)
Prenyltransferases [BR:
syou01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RGE70_04360 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WOT06051
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All DBs
Position
complement(1014417..1015298)
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AA seq
293 aa
AA seq
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MLTESLALYQKRINFQLSSRIDALDDIDPQLKAAMKHGVLLGGKRIRPFLVYAIGEMLNV
KLETLDSCAAAIECMHAYSLIHDDLPAMDDDALRRGQPTVHIAFSEATAILAGDALQALA
FEIISEPIENITPSQNLAMVKALATASGYSGMCGGQAMDLSATNKQIELSTLIQLHKLKT
GALICCAVQFAIIAAKVNEVEQQALLDFAAAIGLAFQVQDDVLDIIASTEELGKPQGSDT
ESNKSTYPKLLGLEGAQTTAVTLVEDALSALAKLPYNSQIIAQFARYIIERRV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaccgagtcacttgctttataccaaaagcgcataaattttcagctttcatcccgt
attgatgccctagatgacattgatccgcaattaaaagcggcaatgaaacacggcgtattg
cttggcggtaaacgcatacgtccatttctagtgtatgcaattggcgagatgttaaatgta
aaacttgaaacactcgactcttgtgccgccgcgattgagtgcatgcacgcttattctctt
atccatgatgaccttccggcaatggacgatgacgcgcttcgtcgcggccaacctacagtg
cacattgcctttagtgaggccaccgctattttagccggtgacgcattacaagcattggca
tttgagatcatcagcgagccgattgaaaacataacgccatcacaaaatttagcgatggtt
aaagccctagcaacagcctcgggatatagtggtatgtgcggtggtcaagcaatggactta
agcgcaacaaataaacaaattgagttatcaacattaatacagttgcataagcttaaaacc
ggcgcgcttatttgctgcgcagtacaatttgccattattgccgctaaagttaatgaagta
gagcaacaagccttgcttgattttgctgcagctatcgggcttgcatttcaagtgcaagac
gacgtattagatattattgccagcaccgaagagcttggaaaacctcaaggttctgacacc
gaatcaaataaaagtacttaccctaaattgctcggtttagaaggtgcacaaaccacagcg
gttaccttggttgaagatgcactatcagcgctggctaaattaccttacaatagccagata
attgcccaattcgctcgttatatcattgagcgaagagtttaa
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