Shewanella youngdeokensis: RGE70_04365
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Entry
RGE70_04365 CDS
T10660
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
syou Shewanella youngdeokensis
Pathway
syou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RGE70_04365 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syou03400
]
RGE70_04365 (xseB)
Enzymes [BR:
syou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RGE70_04365 (xseB)
DNA repair and recombination proteins [BR:
syou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RGE70_04365 (xseB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
YhaL
YihI
DUF6730
KxDL
Helical_needle
DUF8180
DUF6687
Motif
Other DBs
NCBI-ProteinID:
WOT06052
UniProt:
A0ABZ0K0G0
LinkDB
All DBs
Position
complement(1015299..1015538)
Genome browser
AA seq
79 aa
AA seq
DB search
MAKKPENLSFEESLSELEKIVANLEHGDVSLDDALKQFERGIKLVRNSQTKLETAQQKVS
VLMQDEGVDALKPYETEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaaacctgaaaatctctcttttgaagagtcactctccgagctagaaaaaatt
gtagccaaccttgaacacggtgacgtgtctcttgatgatgcactcaagcaatttgagcgt
ggtattaagcttgttcgcaacagtcaaactaaacttgaaacagcacagcagaaagtgtct
gtattaatgcaagatgagggggtcgacgcccttaagccttacgaaacagagggtgagtaa
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