Shewanella youngdeokensis: RGE70_04545
Help
Entry
RGE70_04545 CDS
T10660
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
syou Shewanella youngdeokensis
Pathway
syou00540
Lipopolysaccharide biosynthesis
syou01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RGE70_04545
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
syou01005
]
RGE70_04545
Lipopolysaccharide biosynthesis proteins [BR:
syou01005
]
Lipid A
RGE70_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Nucleoporin_FG2
Motif
Other DBs
NCBI-ProteinID:
WOT06087
LinkDB
All DBs
Position
1053415..1054398
Genome browser
AA seq
327 aa
AA seq
DB search
MASVTVTADENVHTNGWRQFIFENDAFGVIDPSDDGYSNGVGYAWGKAPIASYDDIDLPN
WLKTASDWTYINQGDEGLYTLSYAVVQAMYTPSDLDTPELVEDDRPYAGVLLWHVTMRQF
DQNVSRGLSLDLGVVGPASLAEKTQSTIHGVINARDPQGWEHQLENEAVFRIQSEYLHRF
ANFDIADGLATDASFYGQGSLGNFRSEAGFGLVFRLGTGLEQTYSTINPTGSHSANPYGQ
ISDRGFNWMVYVSAYGGYVLNDITLDGNTFKDSHSVELTHEQGEVSMGVAMRWGSWGLLV
STLRGSKKFEGQIPETDYAGVSISYHY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgtaactgttaccgctgatgaaaatgtccatactaacggttggcgacagttt
atttttgaaaatgatgcctttggagtcattgaccctagtgatgatggctacagtaacggt
gtaggttatgcttggggtaaagcccctatcgccagctatgacgatattgacctaccaaac
tggctcaaaaccgccagtgattggacctacataaaccaaggtgatgaaggtctttacacc
ctaagttatgcagtagtgcaggcaatgtataccccttcagatctagacaccccagaactt
gtagaggacgatagaccgtatgcaggtgtgctgttgtggcatgtaacaatgcgccagttt
gaccaaaatgtgtctagaggtttgtcgttagatcttggcgttgtgggacccgcttcctta
gccgaaaaaacacaaagtacaattcatggggtgattaacgcgcgcgatccacaaggttgg
gaacatcaactggaaaacgaagcggtgtttcgtattcaatctgaatacttacatcgtttt
gcaaattttgatatcgccgacgggctggcaaccgacgcgagtttttatggtcaaggtagc
ttaggtaactttcgtagtgaagccggttttggcttagtattccgtttgggtaccgggctt
gagcaaacctactccacgataaacccaaccggttcacatagcgccaacccttatgggcag
atatccgatcgaggttttaactggatggtgtatgtgtctgcttacggtggctatgtgctt
aacgacattacccttgacggcaacacgtttaaagatagccactcggttgagctcacacat
gagcagggcgaagtgagtatgggcgttgcaatgcgttggggaagttggggattgttggtt
tcgacgctacgcggtagtaagaagtttgaagggcaaattcctgaaaccgattacgctggc
gtaagcattagctaccattactaa
DBGET
integrated database retrieval system
