Shewanella youngdeokensis: RGE70_04710
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Entry
RGE70_04710 CDS
T10660
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00260
Glycine, serine and threonine metabolism
syou00460
Cyanoamino acid metabolism
syou00630
Glyoxylate and dicarboxylate metabolism
syou00670
One carbon pool by folate
syou00680
Methane metabolism
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
syou01120
Microbial metabolism in diverse environments
syou01200
Carbon metabolism
syou01230
Biosynthesis of amino acids
syou01240
Biosynthesis of cofactors
syou04981
Folate transport and metabolism
Module
syou_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGE70_04710 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RGE70_04710 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RGE70_04710 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RGE70_04710 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RGE70_04710 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RGE70_04710 (glyA)
Enzymes [BR:
syou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RGE70_04710 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WOT06118
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All DBs
Position
1110505..1111761
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AA seq
418 aa
AA seq
DB search
MLKKDMNIADYDPQLFAAIEDETRRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDIVEELAISRAKELFGATYANVQPHSGSQANSAVFMALLQGGDKVLGMS
LAHGGHLTHGSNVSFSGKLYDAVQYGIDETTGKIDYAEVERLAVEHQPKMIIAGFSAYSG
IIDWGKFREIADKVGAYLFVDMAHVAGLVAAGIYPNPLPHAHVVTTTTHKTLAGPRGGLI
LSAIDDETIYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALDPEFTTYQEQVVINAKAMA
RTFIERGYDVVSGGTDNHLFLLDLISKDMTGKDADAALGNANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFGEQESINLTNWMCDILDDISDLAVSERVKSQVIELCAKFPVYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagacatgaatatcgcggattacgatccacaattgtttgcagcgattgaa
gatgaaactcgccgtcaagaagagcacatcgaacttattgcttcagaaaactacactagc
ccacgcgtactagaagcacaaggttctcagctgacgaataagtatgccgaaggttacccc
ggtaagcgttattacggtggttgtgagcatgtagatattgtcgaggagttggccatctct
cgcgctaaagaattgtttggtgcaacttacgctaacgtgcagcctcattctggctcgcaa
gctaactcggcagtgtttatggcattgctacaaggtggcgataaagtgctgggtatgagc
cttgcgcatggtggacatttaactcatggctcaaatgtaagcttttcaggtaagctttac
gatgcagtgcaatacggcattgatgaaactacaggtaaaattgattacgctgaagttgag
cgccttgcagttgagcatcagcctaaaatgattattgcaggtttcagcgcctattctggc
attattgattggggcaagttccgtgaaatcgccgataaagtcggtgcttacctatttgtt
gatatggcgcatgttgccggcctagttgcggcagggatttaccctaatccgttgccacat
gcacacgtggttaccacgactacgcataaaacattagcggggccgcgtggtggcttgatt
ttatctgctatcgatgatgaaactatatacaaaaagctcaactcagcagtatttccaggg
gggcaaggcgggcctttaatgcacgttattgcagctaaagcggtcgcatttaaagaagca
cttgatccagagttcaccacttatcaagaacaagtggtaattaatgctaaagcaatggcg
cgaacgtttattgaacgtggctatgatgttgtgtctggcggtaccgacaatcacctattc
ttgcttgatttgattagcaaagacatgaccggtaaagatgctgatgcagcattgggtaat
gccaacattacagtgaataaaaactcggtgcccaatgacccacgctcaccgtttgtcact
tctggattacgtattggttctccagcgataacccgtcgcggttttggtgagcaagagtca
atcaatctgaccaactggatgtgcgatatccttgatgacatcagcgatcttgcggtcagc
gagcgagttaagtcacaggttattgaactatgtgctaagttccctgtttacggttaa
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