KEGG   Shewanella youngdeokensis: RGE70_04720
Entry
RGE70_04720       CDS       T10660                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
syou  Shewanella youngdeokensis
Pathway
syou00740  Riboflavin metabolism
syou01100  Metabolic pathways
syou01110  Biosynthesis of secondary metabolites
syou01240  Biosynthesis of cofactors
syou02024  Quorum sensing
Module
syou_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:syou00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RGE70_04720 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RGE70_04720 (ribD)
Enzymes [BR:syou01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RGE70_04720 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RGE70_04720 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: WOT06120
UniProt: A0ABZ0K0Q1
LinkDB
Position
1112380..1113501
AA seq 373 aa
MWSTEDSQMMSLAIELAKKGLYTTRPNPCVGCVIVKDSVIVGEGYHIRAGGPHAEVYALN
MASDDARGATAYVTLEPCSHYGRTPPCAKALIEHGISRVVIAVTDPNPQVSGRGISMLQA
AGIQVDVGLLTDAAKQINLGFLSKMESGLPRVTVKLAASLDGKTALANGESKWITGPEAR
RDVQRLRARHCALVTGVETILADDPSLNVRHSELGSLASEIAPAEIHQPLRVVLDSKARL
GAKLNLFNVPSPILLVSTCDYPESVKSAWPSHVNHQILPAKNARIDLDALLKLLGQTCNS
VLVEAGATLAGAFVAEQRVDEIVLYQAMKLLGDKGRALLALPQFESMAQIPNINLIDERK
VGRDTRLTLKMSN
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtggtcaactgaagatagtcaaatgatgagccttgctattgaattagcaaaaaaaggc
ctttacaccaccagacccaacccttgtgttggttgcgtgatagtaaaagacagtgtgatt
gtgggtgaaggctatcatattcgtgctggcggcccgcatgccgaagtttacgcgctaaac
atggcttcggatgatgcccgcggtgcaaccgcttatgtgaccttagaaccttgtagtcac
tatggtcgcactccgccttgtgccaaagcgttaattgagcatggtattagtcgagttgtt
atcgctgtgactgatccgaatccacaagtgtcaggtcgtggaatttcaatgttgcaagcg
gcaggtattcaagttgacgtgggtttattaaccgatgctgctaaacaaattaacttaggt
tttttgagtaaaatggagtcaggtttaccacgagtgacggtgaagttggctgccagtctt
gatggtaaaaccgcattagccaatggtgagtcaaaatggatcactgggcctgaagctcgc
cgagatgtacagcgcttacgtgcacgccattgcgctcttgtcactggcgttgaaaccatt
ctagcggacgacccaagcttaaatgtacgccatagtgaactcggtagcttagcaagtgaa
atcgccccagctgaaatacaccaaccattgcgtgttgtattagacagcaaagcaaggttg
ggggctaaacttaatttatttaacgttcctagccctatattgctcgttagcacatgtgac
tatccagaaagtgtcaagtcagcctggccatcccatgttaatcatcaaattttacccgca
aaaaatgcacgcatagaccttgatgcgttgttaaagttgctcgggcagacatgtaattct
gtactagttgaagcaggagcaacacttgctggcgcctttgttgcagagcaacgcgtagat
gaaattgtattataccaagcgatgaagttgctgggcgataaagggcgagctctactcgcg
ttgccgcaatttgagagcatggcacaaatccccaatattaatttaatagatgaacgtaaa
gtgggtagagacactcgcttaacgttaaaaatgagtaattaa

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