Shewanella youngdeokensis: RGE70_04910
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Entry
RGE70_04910 CDS
T10660
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00362
Benzoate degradation
syou00620
Pyruvate metabolism
syou00650
Butanoate metabolism
syou01100
Metabolic pathways
syou01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RGE70_04910
00650 Butanoate metabolism
RGE70_04910
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RGE70_04910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_04910
Enzymes [BR:
syou01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
RGE70_04910
Transporters [BR:
syou02000
]
Other transporters
Primary active transporters [TC:
3
]
RGE70_04910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
WOT06150
LinkDB
All DBs
Position
1150825..1151955
Genome browser
AA seq
376 aa
AA seq
DB search
MEGLIAFWSESGIANFTAGQVLMMVVGCLLIYLAIAKKFEPLLLLPIGFGAILANIPNGG
FTDEGGLLYFAYHVGIETGIFPLLIFMGVGALTDFGALIANPKMLLLGAAAQFGIFATLL
GAIGLNLVPGFEFSMQDAAAIAIIGGADGPTAIFLASKLAPDLLGAIAVAAYSYMALVPL
IQPPIMKLFTTQAEREIKMEQLREVSKQEKILFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELVNIVTIFLGLAVGSKLSADKFLQIETLGILVLGAVAFGIGTA
TGVLMAKLMSKLSGGKINPLLGAAGVSAVPMAARVVNKVGLEANNQNFLLMHAMGPNVAG
VLGSAVAAGVLLAVLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaagggttaattgctttttggtctgagtcaggtattgctaactttacggctgggcaa
gtgctaatgatggttgtcggttgcttgctgatatatttagctattgctaaaaaattcgag
cctctactgctactaccaatcggttttggtgccattttggcaaacattccaaatggtggg
tttactgatgaaggggggctgctttactttgcctaccatgtaggcattgagacggggatt
ttcccgctgctaatttttatgggggttggcgcattaaccgattttggggcgcttattgct
aaccctaaaatgttattgcttggggctgcggctcaatttggaatttttgctaccttactt
ggcgccatcggtttaaatcttgtgccgggctttgagttttcaatgcaagatgcggcagcg
attgcgattattggcggagcggatggacctacggctatctttttagcttctaaattagcc
ccagatcttttgggggctatcgcagtggcagcttattcatatatggccttagtaccactg
atccagcctccaataatgaagctcttcaccacgcaagctgagcgggaaattaagatggaa
cagctgcgcgaagtcagtaagcaggagaaaatattatttccgttgatggtattagggcta
accattttattcttgccagcagcaacgccattggtgggaatgttttgcttaggtaattta
atgcgcgaatctggtgtggtcgataggctatcgaataccgcgcaaaatgaattggttaac
atagtaaccatttttttagggttagcagtcggttccaagttgtcggctgacaagttttta
caaattgaaacccttggaattttggttttaggcgccgttgcatttggcattggtaccgca
actggcgtgttgatggccaaattaatgagcaaattatctggcggtaaaattaacccactt
ttgggggcagctggtgtatctgcagtaccaatggcggcgcgagtggtcaacaaagttgga
ttagaagctaataatcagaatttcttattgatgcacgctatgggacctaatgtagcgggg
gtgctaggtagcgctgttgcagcaggggtattactggctgtattggggtaa
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