Shewanella youngdeokensis: RGE70_06535
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Entry
RGE70_06535 CDS
T10660
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
syou Shewanella youngdeokensis
Pathway
syou03030
DNA replication
syou03430
Mismatch repair
syou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGE70_06535 (dnaX)
03430 Mismatch repair
RGE70_06535 (dnaX)
03440 Homologous recombination
RGE70_06535 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syou03032
]
RGE70_06535 (dnaX)
03400 DNA repair and recombination proteins [BR:
syou03400
]
RGE70_06535 (dnaX)
Enzymes [BR:
syou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGE70_06535 (dnaX)
DNA replication proteins [BR:
syou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGE70_06535 (dnaX)
DNA repair and recombination proteins [BR:
syou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGE70_06535 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_2
AAA_14
PIF1
AAA_30
AAA_7
AAA_assoc_2
TniB
TsaE
AAA_lid_RFC1
RCF1-5-like_lid
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WOT06423
UniProt:
A0ABZ0K3J3
LinkDB
All DBs
Position
1524996..1527752
Genome browser
AA seq
918 aa
AA seq
DB search
MSYQVLARKWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSIARLFAK
GLNCEQGVTATPCGKCSACVEISEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRY
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ
EEIGNQLSNILTRETLSFEPAALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLEQVQTM
LGSIDEKQVLALLEALANADVMALMQVSANVLSFGAEPEEVLRSLLELLHQITLTQFAPA
AAQMSLYSEQINAFAQQLAPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVTFVPD
KPVSKWVTDNPATIAIPKSDVKPLPGSANSEKKTVVEADAKRVPSHAKLPQVPLADTQGA
AVSEEASSAGDDLESMNSEMAVIISQAQSQGYSKPDTSDAQPVLVESESTDIATPESESA
QVTAPAMAEHLSPVPTTESEPEVAEFDATSVHNTDVNENVEPALSIAPESYVGEDDLSAY
SQYAGAQASDFDDNGFESGGFDVDAFNSTNIQPEAANVAAPELIDSLPAVTTSLEQSVAQ
TTPAADSANLDDDILDAVLAARDSLLSGLGEDDLKESSAKKSDKERKPFTPPKRKPQPLA
AEAVVANNSEAEPSNTAAGQASDIIDRPPWEAPHEQDPCARFEDVNASQTVVESAPVAAD
TGTASPTYTQTAESASIKEVVDVGSLTSVQEHGLHLPTLPSGELTGNDIDLKWYRFMAEL
EVGGRVRQLAVNSVCHNFEQPLSLLLKPDQKHLAAGIAIEQLEEAMSLALGEPCTVKITV
GLDNIRETPLEVRRRFHQELLAQAHHGLMEDENIRWLTAYMGAQLTPDSLSYAPELLVNK
GKTIELVDMSNFKRLPES
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaggtgttagccagaaaatggcgccctgccaaatttgagcaaatggttggt
caatctcatgttttacatgcattaaccaatgcgctcacacagcaaagactacatcacgca
tatttattttccggcacccggggtgtaggaaaaaccagtattgcgcgtctttttgctaaa
ggcttaaattgtgagcaaggcgtcactgcaacgccatgtggcaagtgctctgcttgtgtt
gaaatctcagaagggcgttttgttgatctcattgaggttgatgctgcatctcgcaccaaa
gtcgacgatacccgagaactgctcgataacgtgcaatatcgcccaagtcgtggtcgttat
aaagtatacctaattgatgaagtgcacatgctgtctcgcagcagttttaatgcactatta
aaaacccttgaagaaccgcctgaacacgttaagtttttgcttgcaacaacggacccacaa
cgtttacccgttacggtgttatcacgctgtttacagtttaacctcaagagtctgacccaa
gaagaaataggcaaccaattaagcaatatattgacacgagaaacgctgagctttgagcct
gcagcgttaacgttattggctaaagctgcaaacggtagtatgcgagatgcattaagctta
acagatcaagccattgcgtttggtgctggacaagtcaagcttgagcaggtgcaaacgatg
ctcggcagtattgacgaaaaacaggtcttagccttgcttgaagcgttagctaatgccgat
gttatggctttaatgcaagtcagtgcaaatgtgctgtcatttggcgcagagcctgaagag
gtgctgcgaagtttacttgagttactgcatcaaattactttaacgcagtttgctcccgca
gcggcgcaaatgtcactttatagcgaacaaattaatgcttttgcccagcagttagcgcca
gaacaagtacagctttactaccaattgttgctgactggccgcaaagatcttcctcatgca
ccagatcctaaatcagggcttgaaatggcgctgttacgtgcagtgacgtttgttcccgat
aaacccgtgtcaaagtgggttaccgataacccagccaccatcgcgatacccaagagcgat
gtaaagccattacctggcagtgctaacagcgaaaaaaaaaccgttgttgaagccgacgcc
aaacgagtaccgtcacacgctaaactgccccaagtgcctctagctgacactcagggcgca
gcggtttctgaagaagcttcgtctgcgggtgatgacctagagagcatgaatagtgaaatg
gctgtcattatcagccaagcacagagccaaggttattcgaagcccgatacttcagatgct
caaccggtgttggtcgaatccgagtcgacagacatagccacgccagagagtgagtctgcg
caagttacagcgccagcgatggcagagcatctttctccggtccctacgacagaaagtgag
ccagaagtcgctgagtttgacgctacatccgtacacaacacggatgtgaatgaaaacgtt
gagcctgcattatccatagctccagaaagttatgttggagaagacgatttatctgcttat
tctcaatacgccggtgcacaagcttccgattttgatgataatggctttgaaagtggcggg
tttgatgttgatgcttttaattcaaccaatattcaaccagaggccgccaatgttgctgct
cctgaactgatagactcattaccagcagttacaacaagtttagaacaaagcgttgctcaa
acaactcccgctgctgatagcgctaatttagatgacgacattcttgatgccgtcctcgca
gcgagggattctttgctgagtggattaggtgaagatgaccttaaggagagttcagcaaaa
aagtccgataaagagcgtaagccctttacgccgcccaagcgtaaaccacagccactagca
gccgaagccgttgttgcaaacaacagcgaagctgagccgtcaaacactgcggcaggtcaa
gcaagcgacattatcgacaggccgccatgggaagcgccccatgagcaagatccctgtgcg
cgatttgaagatgttaatgccagtcaaactgtcgttgaatcagctcctgtggcggcagac
actggcacggcctcaccaacgtacacacaaacggcagagtctgctagcatcaaagaggtt
gttgacgttggcagtttaacttcagttcaggaacatgggttacacttaccaacactgcca
agtggtgagttaacgggtaatgacattgacttaaaatggtaccggtttatggccgaactt
gaagtaggtggtcgtgttagacaacttgctgtgaactcggtttgccataattttgagcaa
cccttgtctctgttgctaaaaccggatcaaaagcaccttgcagcggggatcgccattgaa
cagttagaagaggcgatgagcctagcgttgggtgaaccttgtactgtaaaaattactgtt
ggactcgacaacatcagagaaacaccacttgaagtaagaagacgttttcaccaagagtta
cttgctcaagcgcatcatggtttgatggaagatgaaaacatccgttggctaacggcttat
atgggcgcacagttgacacctgattcgttatcttatgcaccagaattactggtaaataag
gggaaaaccattgaattggtcgatatgtcgaactttaagcggttacctgagtcataa
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