Shewanella youngdeokensis: RGE70_07100
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Entry
RGE70_07100 CDS
T10660
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00020
Citrate cycle (TCA cycle)
syou00480
Glutathione metabolism
syou00720
Other carbon fixation pathways
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
syou01120
Microbial metabolism in diverse environments
syou01200
Carbon metabolism
syou01210
2-Oxocarboxylic acid metabolism
syou01230
Biosynthesis of amino acids
syou04146
Peroxisome
Module
syou_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syou_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGE70_07100
09102 Energy metabolism
00720 Other carbon fixation pathways
RGE70_07100
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RGE70_07100
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGE70_07100
Enzymes [BR:
syou01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RGE70_07100
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
WOT06520
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Position
1650840..1653065
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AA seq
741 aa
AA seq
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MNDKVSTIIYTETDEAPALATLSLLPIIKKFTKSAGIDVETRDISLSGRIIAVFPENLTA
EQKMGDALAELGELANKPEANIIKLPNISASLPQLKACILELQNKGYDIPSYPDEPKNAA
EKEFQARYDRVKGSAVNPVLREGNSDRRAPGSVKKFAQKNPHSMGKWSPDSKSHVAHMHE
GDFYGSEKSVTVAAPGSVSIVLTKTDGSEQVLRKTIALQAGEVIDSAVMSKAALVDFYER
ETLKAKEQDVLLSLHLKATMMKVSDPILFGHAVKVFYKDVFTKYGELFEQLGVDVNNGVG
DVYAKIASLPAQQQAEIEAAIAQVYTNSAELAMVDSDKGITNLHVPSDVIIDASMPAAIR
TSGQMWGPDGQLKDMKAMIPDRCYAGVYQATIDFCINNGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIAAAGIVNVIDQDGAVLMSHQVEAGDIFRMCQVKDAPIRDWVKLAVNRSR
LSATPAVFWLDAARAHDAEIINKVELYLKDHDTSDLEIHIMSPVEATRFTLERVRAGQDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTTNNAKAQVLADTLDLAIGQFLDTNKSPSRRVGELDNRG
SHYYLALYWAQAIAAQTQDSELQSQFAAFAEGLTRNEQKIVAELNGAQGPAVDLGGYYRL
DATKAAKAMRPSATLNAIIEA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaagtatcaaccataatctataccgaaacagacgaagctcctgcattagca
acgctgtctttgttacccattattaaaaagtttactaaaagtgccggtattgatgtcgaa
acccgtgatatttcattatctggtcggatcatcgcagtatttcctgaaaatttaacggct
gagcaaaaaatgggtgatgctttagctgaactgggcgaattggctaataagccagaagca
aacatcattaaattgcctaatataagtgcatctttgccacagcttaaagcgtgtatcttg
gagctgcaaaacaaagggtatgacattccaagttacccagatgaacctaaaaacgctgca
gaaaaagagtttcaggctcgctacgacagagttaagggaagtgcggtaaacccagtattg
cgcgaaggtaactctgatcgacgtgcaccaggttcagttaaaaagtttgctcaaaaaaat
ccacactcaatgggcaagtggtcaccggattcaaagtctcatgttgcgcacatgcatgaa
ggcgatttttatggcagtgaaaagtcagtcacagtggcagctcctggcagtgtttctatt
gtactgaccaagaccgatggttcggagcaagtattacgaaagacgattgcattacaagcg
ggtgaagtgattgactctgctgtgatgagtaaagcagcattagtcgatttttatgagcgt
gaaacgctaaaggcgaaagagcaagacgttctattatcactgcacttaaaagcgaccatg
atgaaagtttctgacccgattctttttgggcatgcggttaaagtattctataaagatgta
tttactaaatatggtgagttatttgaacagctcggcgttgacgttaataacggtgtgggt
gatgtttacgccaaaatagcgtctttacctgctcagcagcaagctgaaattgaagctgct
attgcacaggtgtacaccaacagtgcagaacttgcgatggttgattcagataaaggcatt
accaatctacatgtaccaagtgatgtaattatcgatgcctcaatgcctgccgctattcgt
acgtcaggccaaatgtggggcccagatgggcaactcaaagacatgaaagcgatgatccca
gatcgttgctacgctggtgtttaccaagcaacaatcgatttttgtattaacaatggtgcg
tttgacccaagtacaatgggcagtgtaccgaatgttggtttaatggcacaaaaagcggaa
gagtacggtagccacgataaaacattcgaaatagctgccgcaggaattgtgaatgttatt
gaccaagatggcgcggtattaatgtcgcaccaggttgaagctggcgatatttttagaatg
tgccaagtgaaagacgccccgattcgtgattgggttaagctggctgttaatcgttcacgt
ttgtctgctacacccgctgtattttggctcgatgcggctcgtgctcatgatgctgaaatt
atcaataaggttgaactgtatcttaaagaccatgacaccagtgaccttgagatccacatt
atgtcacctgtggaggctactcgatttacattggagcgggtacgcgctggtcaagacacg
atttctgtaacaggcaacgtgttacgtgattacctaactgacttgtttcctatcttggaa
cttggtactagtgccaaaatgctgtcgattgtcccgttaatgaacggcggtggtttattt
gaaactggtgcgggtggcagtgcacctaaacatgttcaacaagttgaaaaagaaggacac
ttgcgttgggactctttaggtgagtttttagcattagccgcttctttagagcatttaagt
caaacgacaaataatgcaaaagcacaagtgctagccgatacacttgaccttgctattggt
cagtttcttgatacaaacaagtcaccatcacgtcgtgtaggtgagttagataatcgtggt
agtcactactacctagcactttactgggctcaagctatagcggctcaaactcaagactct
gagttacaatcccagtttgctgcatttgcagaaggtcttacccgtaacgagcaaaaaatt
gtcgccgagcttaatggtgctcaaggcccagcagtggatcttggcggctattaccgtctt
gatgcaactaaagctgctaaagcgatgcgtccgagtgctacattaaacgcgattattgaa
gcttaa
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