Shewanella youngdeokensis: RGE70_08300
Help
Entry
RGE70_08300 CDS
T10660
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_08300
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
ribosomal protein modification factors
RGE70_08300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
WOT06736
UniProt:
A0ABZ0K2X4
LinkDB
All DBs
Position
1930051..1932237
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISEKDRTGILRSIERCTVKKVVQT
GPEFKIETVENLDADANAMLMGQADSDASTYILGKDLPLEQTIANMTGMLADLGMKIEIS
SWRNIIPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGQE
IANSEFVHYPNEKWFALEQDDSLPAGLLDEQCLAIYNPDGELAGSHLIDTNSGNVERGIC
AIPYVRHCDGETVYFPSNLIENLFLSNGMSAGNNLQEAKVQCLSEIFERAVKRQIIEQEI
ILPDVPQTVLEKYPSILAGIAGLEAQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDVPKPTFDSLTVTEPENFVEHFIDSTGVISWRF
FSSNHDYDFCEWDFSGTNEEETESLFGILADIGKEAYIAEFDQVGASVCRILVPDYSEVY
PVEDLIWDNTNKSLQYREDILNLHSLDDDALADLVERLEESQLDNQTDIPTLIGIVFDEN
TPWGQLTIIELKILIYLALGELENAIELVGEFLQYNDNTVERGLFYQAVNAVLEVTLDED
LELEHFIANFNRMFGEDNMNNVVGSVTGEVKFFGLTKTSMALEGIEPHLRLIESYKKLHQ
ARKNNVTS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaattttctcgacaaccttagactggaagcaaagtttgatgacttt
actgttactgccgaccagcccattcgctataaaggcgatggttctgcccccagtcccttt
gactatttcttagcatcttcagcgctttgcgcggcttattttattaaagtttactgtaag
gctcgtgatattccgaccgacaacatccgtttgtcacaaaacaacattgttgatcctgaa
gaccgttataaccaaatctttcagatccaggttgagctgccagaagatatttcagaaaaa
gaccgaaccggcattttacgttctattgagcgttgcacggttaaaaaagtggtgcaaact
gggccagagtttaaaatcgagacggttgaaaacctagatgctgacgctaatgccatgtta
atggggcaagcggatagcgatgctagcacgtacattttgggtaaggacctaccgcttgag
caaaccattgccaatatgactggtatgctggctgacttgggcatgaagattgaaatttcg
tcatggcgaaatattattccaaacgtgtggtcgctacatatccgcgatgctgcatcaccg
atgtgctttaccaatggtaaaggtgccactaaagaaagcgctctttgttcggcgctcggt
gagtttattgaacgtttgaactgtaactttttctataatgaccagttttttgggcaagaa
atcgccaacagtgaatttgtgcattatcccaatgaaaagtggttcgcgctcgaacaggac
gattcacttccggccggcctgctagatgaacaatgtttagctatttataaccctgacggt
gagcttgcaggctctcacttgattgatactaactcaggtaacgttgaacgtggtatttgt
gccattccatatgtgcgtcattgtgatggtgaaacggtttacttcccgtcgaacttgatt
gaaaacttattcctaagtaatggcatgagtgcgggtaataatttacaagaagctaaggtt
cagtgtttatcagaaatatttgaacgtgcagttaaaaggcagatcattgaacaagaaatt
atcttgcctgatgtgccacaaactgtgttagaaaagtacccgtctattttagccggaata
gctggactagaagcgcaaggttttccggttgttgtaaaagatgcatcattaggtggccag
ttccccgtgatgtgtgtgactttgatgaaccctaaaacgggtggtgtgtttgcctcgttt
ggtgcgcacccaagccttgaagtcgcattggagcgtagtttgaccgagttactgcagggc
cgcagttttgaagggttaaacgatgtgccaaagccaacatttgacagcttaaccgtgact
gaacctgaaaactttgtcgagcattttatcgactctaccggtgtgatttcatggcgcttc
tttagcagtaatcatgattatgacttctgcgaatgggatttttctggcaccaatgaagaa
gaaaccgagagcttgttcggtatattggcagacataggcaaagaggcctatattgctgaa
tttgatcaggttggggcatcagtgtgccgtattttagtacctgattactcagaggtttac
ccagtagaagatctcatctgggataacaccaataagtcactacaataccgcgaagacatt
ttaaacttgcactcgttagatgatgacgcattagcagatctggtcgaaaggcttgaagaa
agtcagcttgataaccaaaccgacattccaaccctaatcggtattgtgtttgatgaaaat
accccatggggtcagttaactatcattgaacttaagatccttatctacctggcattaggc
gagcttgaaaacgctatagagctggtaggtgagttcttacagtataacgacaacaccgtt
gaacgtggcttattctaccaagcggttaacgctgtgcttgaagtcactttagatgaagac
cttgaacttgagcactttatcgctaacttcaacagaatgttcggtgaagacaatatgaac
aatgtggttgggtcggtgaccggtgaggttaagttctttggattaactaaaaccagtatg
gcacttgaaggtatagagccacatttaagattgattgaaagctataaaaagttgcatcaa
gcacgtaaaaacaacgtgactagttaa
DBGET
integrated database retrieval system
