Shewanella youngdeokensis: RGE70_08565
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Entry
RGE70_08565 CDS
T10660
Symbol
cobD
Name
(GenBank) threonine-phosphate decarboxylase CobD
KO
K02225
cobalamin biosynthesis protein CobC
Organism
syou Shewanella youngdeokensis
Pathway
syou00860
Porphyrin metabolism
syou01100
Metabolic pathways
syou01240
Biosynthesis of cofactors
Module
syou_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGE70_08565 (cobD)
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Motif
Pfam:
Aminotran_1_2
NDUF_B12
Motif
Other DBs
NCBI-ProteinID:
WOT06787
UniProt:
A0ABZ0K2K0
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Position
2000488..2001531
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AA seq
347 aa
AA seq
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MTLLHHGGRLKEVAKQYHIAETLWVDLSTGVSPWHYPIPEIPAQYWNRLPEEADDLLDAA
AKYYGGKNPLPVAGSQSAIQTLPKVLAFERGGAGKVLLPLVGYKEHERAWRMAGWQVDIY
GDDLETTNANGHPTPTTAQIASCDVLLVINPNNPSAHLIPPHVLTSWLADLTANGSYLVI
DEAFMDITPQHSMMPALATSEQLIILRSVGKFFGLAGIRAGFVFCPRYIRDKLETQLGPW
CVNGPARFICTHAFKDIAWHALQTHRLEKSSQRLANLLSILPGMITGTGLFQTVYLTVAK
KWHIDYCQHGILTRLTDEQDALRFGIPETEEQWMRLEQVTLLLVKHR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgactttattacatcatggtggccgcttaaaagaggtcgctaagcaataccatatcgct
gagacgttatgggttgatttatcaaccggagtcagcccgtggcattaccccattccagag
atccctgcgcaatactggaatcgcttacctgaagaagctgatgacttacttgatgctgcg
gccaaatattacggcggcaaaaatccgctgcctgtcgccggttcgcagtcggcaatccaa
acgctacctaaagtgctggcgtttgagcgtggtggcgccggcaaggtattactgccgtta
gtgggttataaagagcatgagcgggcttggcgtatggcgggctggcaagttgatatttat
ggtgatgaccttgagaccacaaatgctaatggccacccgacgccaacaacggcgcaaata
gccagttgcgatgtattattggtcatcaatcccaataacccttcggctcatttaataccg
ccgcacgtgctaacttcgtggttggctgacttaacggccaatggcagttatttagtgata
gatgaagcatttatggacatcactccgcagcacagcatgatgccggctctcgctacgagt
gagcaactaattattttgcgttcggtaggcaagttttttggtttggcaggtattcgtgct
ggctttgttttttgcccacgctacattcgcgataaactagaaacacaattaggcccatgg
tgtgttaatggacccgctaggttcatttgtacacatgcatttaaagatatagcttggcat
gcactgcaaacacatcgtttggagaaatctagtcagcgtttagcaaacctgctgtcaatt
ttacctggaatgatcacgggcaccgggttgtttcaaacagtttatctcacagtggcaaag
aagtggcatattgattattgccagcatggtattttaacgcgccttactgatgaacaagat
gctttacgctttggtatacctgaaacggaagagcaatggatgaggctagagcaagttacc
ctgctattggttaagcatcggtaa
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