Shewanella youngdeokensis: RGE70_08785
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Entry
RGE70_08785 CDS
T10660
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syou03032
]
RGE70_08785 (ihfB)
03036 Chromosome and associated proteins [BR:
syou03036
]
RGE70_08785 (ihfB)
03400 DNA repair and recombination proteins [BR:
syou03400
]
RGE70_08785 (ihfB)
DNA replication proteins [BR:
syou03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RGE70_08785 (ihfB)
Chromosome and associated proteins [BR:
syou03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RGE70_08785 (ihfB)
DNA repair and recombination proteins [BR:
syou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RGE70_08785 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WOT06819
UniProt:
A0ABZ0K408
LinkDB
All DBs
Position
2043275..2043562
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AA seq
95 aa
AA seq
DB search
MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMADTLEGGDRIEIRGFGSFSLHYRAPRI
GRNPKTGTSVELEGKYVPHFKPGKELRERVDAINA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccgaactaatcgaaaagcttgccactaggcagtcgcagctgtctgctaaa
gaagtggaaagtgctattaaagaaatgttggagcaaatggctgatacattggaaggtgga
gatcgaatagagatccgcggctttggtagtttttcacttcattatcgtgcaccgcgcatt
ggccgaaacccaaaaactggaacatcagttgaattggaaggcaaatacgtaccgcacttt
aagccaggcaaagaactgcgcgaacgtgttgatgcaatcaacgcctaa
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