Shewanella youngdeokensis: RGE70_10265
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Entry
RGE70_10265 CDS
T10660
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syou01011
]
RGE70_10265
Enzymes [BR:
syou01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RGE70_10265
Peptidoglycan biosynthesis and degradation proteins [BR:
syou01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RGE70_10265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
WOT03735
UniProt:
A0ABZ0JTV7
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All DBs
Position
2387522..2389447
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AA seq
641 aa
AA seq
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MHKQLSAMVFLVLTYISFSATAALTSEQQMYLDAKKALDKQHLTTYQTLRGKLEGYPLTI
YLDFHKNISSILKQPADQAVLSFEQFKGSPLYNTARARYLTQSGKRKRWKDFLTVSPKRP
NSITLQCYFYRAQLQQGDKELAYKGASELWQHGRSRPKACDPLFKEWKKAGFQTQELIWS
RMLLSFEQGQYGLLTYLSRQVTSNKAAAKRLLAVYKDPRSLRHTSKYNEKSNITATIVDF
GLRRLAKKDLKQAVKLFAKYQKMDRFSEYKGRQLGRYLVGRALTYQTEALKGFVDTMLPL
LDSDDLIEKRLRWALRTNDQVQFEHFIPMLSKQKQNTARWTYWRAKILQRSSNKQKQQQA
QTLLEKLSQKRNFYGFLAASSIKVPFEVQHQSTSSVPERQSEIFADNGLARVTELLALDK
QSEARAEWVMLLNRHTKNMQKEYAVYAVSNQWHSMGVQASIQAKLWNDMDMRFPYAAQKS
FTQASKKYAVDIDEIRAIARRESAYYPNATSGVGARGYMQLMPATAKQTAKKAKLKYRGT
KSLYDGELNIALGSAYYSTLLKQFDKNRVLATASYNAGPSRIKGWLKKSDAKLDAISFIE
SIPFTETREYVQAVLSYRVIYQIKQDKKPELFSESELQFKY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagcagttaagcgccatggtatttttagtgctaacgtacatttctttttcagct
acggcggcattaacctctgagcagcaaatgtacttagacgcgaaaaaggcgctcgataag
cagcatcttaccacttatcagaccctacgaggtaagctagagggatacccattaacgata
tatctcgatttccataaaaatatatcgtcaatattaaaacaacctgccgatcaagccgtg
ctgtcttttgagcaattcaaaggcagtccgctatacaacactgcacgcgccagatacctc
acccaaagcgggaaacgcaaacgctggaaagactttcttaccgttagtcccaaaaggcca
aacagcataacattgcagtgctatttttacagagcacaactacaacaaggtgataaagaa
cttgcctataaaggcgctagcgagctgtggcaacatggccgttcacgcccaaaggcctgt
gatccactatttaaagagtggaaaaaagcgggttttcaaacccaagagctcatttggtca
agaatgttactaagctttgaacaagggcaatacgggttgttgacctacctatcgcggcaa
gttaccagtaacaaagctgccgctaaacgtctattagcagtttacaaagatccccgtagt
ctacgccatacatccaaatacaatgaaaaatcaaacatcactgctacgattgttgatttt
ggactccgacgccttgcaaaaaaagatctcaaacaagcagtaaaactttttgctaaatac
caaaaaatggatcggtttagtgaatacaaaggccggcagttgggtcgctacttggtaggt
cgcgcattaacatatcaaacagaagcgctcaaaggctttgtcgataccatgttgccctta
cttgatagcgatgacttaattgaaaaacgattacgttgggcattaagaacaaacgatcaa
gttcagtttgaacatttcatcccgatgctcagtaagcagaagcaaaatactgctcgctgg
acctattggcgtgccaagatcttgcaacgcagcagcaataaacaaaaacaacagcaagcg
caaacactactagaaaagttaagccaaaaaagaaatttttatggttttttagccgcaagt
agcatcaaggtaccttttgaggttcaacaccagtcaacctccagcgtacccgagcgccaa
tcagaaatttttgccgataacggcctagctcgagttaccgaattactcgctttagacaag
cagtctgaggcgcgcgccgaatgggtgatgttattaaacagacacactaaaaatatgcaa
aaagaatatgctgtttatgcagtatcaaaccaatggcatagcatgggtgtacaagcgagc
attcaagctaaattatggaacgacatggatatgcgcttcccctatgcagcgcaaaagtcg
tttacccaagccagtaaaaagtatgctgtcgatattgatgaaataagagccattgccaga
cgagaaagtgcctactaccccaatgcaacatcaggtgttggagcaaggggctacatgcaa
cttatgccagcaacggcaaagcaaacagctaaaaaagccaagcttaagtaccgcggcaca
aagagcctttatgatggtgagcttaatattgcgctcggcagcgcttattattcaacctta
ctcaagcaatttgataaaaacagagtactggcaacagcctcttataatgccggcccgagc
cgcataaaggggtggttaaaaaagagtgacgcaaaactcgatgcaatcagttttattgag
tcaattcctttcactgaaacaagagagtacgtgcaagcggtgctaagctaccgcgtgatt
tatcaaattaaacaggacaaaaaacctgagctgttttctgaaagtgaattgcaatttaaa
tactaa
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