Shewanella youngdeokensis: RGE70_10390
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Entry
RGE70_10390 CDS
T10660
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
syou01002
]
RGE70_10390
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syou01011
]
RGE70_10390
Peptidases and inhibitors [BR:
syou01002
]
Cysteine peptidases
Family C82
RGE70_10390
Peptidoglycan biosynthesis and degradation proteins [BR:
syou01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RGE70_10390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Zn_Ribbon_Topo
Motif
Other DBs
NCBI-ProteinID:
WOT03759
UniProt:
A0ABZ0JVG1
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All DBs
Position
complement(2430196..2431524)
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AA seq
442 aa
AA seq
DB search
MSAQNMLAQQLALMRAVEPESNYEHDQTRLTTTLVPSDQLLAVERHIVDFWTRRQIPIRN
TAYQSIQDPYTRAMAVEPDLESYLQLQNRLKHLKWLSETQSWSAIELEGLIRPNKSHQSI
ATIAKRLWLLADADSNLLDPQKPNFYHSALVNSVKRFQKRHGLTPDGIIGSETLKWLNLA
PSDRSLLLSKNFIQRAEFMAQQLDRFLVVNIPAFEMELFNNGRIELASKVIVGKPYRQTP
VMSGSISNVVINPSWRVPKNIMYNDLLPKVRENGHYIEQRNFDVFDRNNKLVKYSAEQWS
ELARGPFPFRFVQRPGGSNTLGRYKFYFPNDDSIFLHDTSDPNLFNRSNRALSSGCIRVE
DVEGLANWIAANLVKDKQTWVDRHVDKKKTQWFALNSTLDVHLVYWTAWIDKNSQAQYRN
DIYHKQSLTTVATNSIEHNNDL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcaaaatatgctcgcacagcagttagcgttaatgcgagcagttgaaccagag
tcgaactatgagcatgatcaaactcgcttaacaaccacactggtaccctctgatcaacta
ttggcagtagagcgccatattgtagatttttggacccgcaggcagatcccaattagaaat
actgcctaccaatcgattcaagatccctacacaagagcaatggctgttgaacccgacttg
gaaagttatttgcaactgcagaatcgattaaagcatctaaagtggttatcagaaacgcaa
agctggtctgcgatagaacttgaaggccttattcgacctaacaagtcacaccaatcaata
gcgaccattgccaaacgcttatggttacttgctgacgctgacagtaatttattagatcct
caaaaaccaaatttttatcactcagcgttagttaatagcgttaaacgatttcaaaaaaga
cacgggctaacacctgacggcattattggatcggaaacattgaagtggctaaacctcgcc
ccctcagatcgctcattgctattaagcaaaaatttcattcaacgagccgaatttatggct
cagcaattggaccgttttttggttgttaatattccagcatttgaaatggagctttttaac
aatggtcgtatagagttagcatcaaaagtcattgtagggaaaccctaccgtcaaactccg
gttatgagcggatcaatttcaaatgtggtgattaatcctagctggcgagtccctaaaaat
atcatgtataacgatttgcttccaaaagtcagagaaaacgggcattacattgagcagaga
aactttgatgtgtttgatcgaaataataaattagttaaatattctgctgagcaatggagt
gagttggcaagagggccatttccatttaggtttgttcaacgtccgggtggcagcaataca
ttaggacgttacaagttttactttcccaatgatgacagcatatttttgcatgacacttca
gatcccaatttatttaatagaagtaaccgagccttgtcgtcaggttgtattcgagttgaa
gatgttgaggggttagctaattggatcgccgctaatttagtgaaggacaagcagacttgg
gttgataggcatgtggataagaaaaaaacccaatggtttgcgctcaatagtacattagat
gttcatttagtgtattggaccgcttggatcgacaaaaatagccaagcacaatatagaaac
gatatttaccataaacagtcattaaccactgttgcaacaaactcgatagaacataacaac
gacttatag
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