Shewanella youngdeokensis: RGE70_11100
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Entry
RGE70_11100 CDS
T10660
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
syou Shewanella youngdeokensis
Pathway
syou02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RGE70_11100 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_11100 (msbA)
Enzymes [BR:
syou01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RGE70_11100 (msbA)
Transporters [BR:
syou02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RGE70_11100 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
APS_kinase
AAA_22
AAA_16
AAA_29
DEAD
nSTAND3
ABC_ATPase
RsgA_GTPase
NB-ARC
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
WOT03891
UniProt:
A0ABZ0JUI6
LinkDB
All DBs
Position
complement(2600680..2602506)
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AA seq
608 aa
AA seq
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MTTSSKNEVWKVFKRLLGYLKPLKAVLFFAVLGLTMYAVVDATFIAVIKPFIDEGFGGQA
SQATSAAGGALGNVDLGMSDGFESDNKVLMMAPIVVIVLFSLRGLANFLSTYCVAYMSAR
VILDMRQEVFEHYLKLPVSYIDSENTGNLISRVTYDTEQIARASGSALITIVRDSISVIG
MIGIMFYFSWKLSLVILIVGPAIGLVISVVSRRFRKVSKNIQAAMGGVTAATEQMIKGHK
NVLSFGGQETEAERFAKVNAQNRYQTMKLATAQAISQPLVMIIGSFAIAFVLYAASIDSM
KAELTAGTFATILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTHPEEDNGKLEV
DRVKGELAFNHVDFSYPGQDKLALNSIDFTVKQGQTIALVGRSGSGKSTIASLVTRFYSG
LQAGEITLDGANIDDYKLTSLRRQVALVSQQVTLFNDSIANNIAYAYPGEASREQIIQAA
TLAHAMEFIEPLPLGLDTQIGENGVMLSGGQRQRIAIARAILRNSPVLILDEATSALDTE
SEKAIQHGLDNLRQNRTSIVIAHRLSTIESADQILVVEQGQIVERGTHVSLLEKQGVYYK
LYQMQFGS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcttctaaaaatgaagtctggaaagtctttaagcgactactcggctattta
aaacctctcaaagctgtcctgttttttgctgtactgggtttaaccatgtatgccgtcgtt
gatgcgacattcatcgcggtgattaaaccatttattgatgaagggtttggtggacaagca
agccaagctacatctgctgcaggtggtgctttaggtaacgttgaccttggcatgagcgat
gggtttgaatctgacaataaggtgctaatgatggcgccaattgtggtcatcgtgttgttt
agcttgcgtggcttagctaattttttatcaacttactgtgtcgcttacatgagtgctcga
gtgatcttggatatgcgccaagaagtcttcgaacactacttaaagctaccggttagttac
attgacagtgaaaacaccggtaatcttatttcgcgcgtaacctacgatactgagcaaata
gcccgagcctcaggtagcgcattgatcaccattgttcgcgatagtatttcggttattggc
atgattggtatcatgttctatttttcttggaaactgtcgttggtgatcttaattgtaggc
cccgctattgggcttgtgatctctgtggtgagccgtcgttttcgtaaggtgtcgaaaaat
attcaagctgcgatgggtggggtaacagccgcgaccgaacagatgattaaaggccataaa
aacgttttatcttttggtggtcaagaaacagaagctgagcgttttgcgaaagtgaatgct
cagaaccgataccaaaccatgaaactggctacagcacaggccattagccaacctctagtg
atgattattggctcatttgcgatagcatttgttttgtatgcagccagtattgatagcatg
aaagcagagcttacagcaggtacttttgcgacaattttgggcgcgatgcttgccatgctg
caaccgattaaaaacctaacccgtgttaatgctgagttccaacgcggtattgcagcttgt
acaacagtgtttgaattattagatacccatccggaagaagataacggcaaacttgaagtt
gaccgtgttaaaggcgagctggcatttaatcatgttgactttagctatccagggcaagat
aaactggctcttaatagtatcgactttactgtaaaacaaggtcaaaccatagcgctggtg
gggcgttcaggctcgggtaaatcaactattgccagcttagtaacccgtttttatagtggg
ttacaggccggtgaaatcactttagatggcgccaatattgatgattacaagctaacttcg
ctacgtcgtcaagtcgcgttagtgtcgcagcaagttaccttatttaatgactctatagcg
aacaatattgcttatgcgtatccgggggaagcttcccgtgagcagattattcaggcggca
accttagcccatgctatggagtttattgagccgttaccgttagggcttgatactcaaatt
ggagaaaatggtgtgatgttgtcaggtgggcaaagacaacgtattgccatcgccagagcc
atcttacgtaactcgccagtgttaatccttgatgaagctacatctgcgcttgataccgag
tctgaaaaagcgattcaacatggccttgataatttaaggcaaaaccggacatcgattgta
attgcacatcggttatcaacgattgagagcgctgaccaaattttggtggttgaacaaggt
caaattgtggagcgcggtacgcatgtgtccttacttgagaagcaaggcgtatattacaaa
ctttatcagatgcagtttggaagctaa
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