Shewanella youngdeokensis: RGE70_11850
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Entry
RGE70_11850 CDS
T10660
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00071
Fatty acid degradation
syou00280
Valine, leucine and isoleucine degradation
syou00310
Lysine degradation
syou00362
Benzoate degradation
syou00380
Tryptophan metabolism
syou00410
beta-Alanine metabolism
syou00640
Propanoate metabolism
syou00650
Butanoate metabolism
syou00907
Pinene, camphor and geraniol degradation
syou00930
Caprolactam degradation
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
syou01120
Microbial metabolism in diverse environments
syou01200
Carbon metabolism
syou01212
Fatty acid metabolism
Module
syou_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RGE70_11850 (fadJ)
00650 Butanoate metabolism
RGE70_11850 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
RGE70_11850 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RGE70_11850 (fadJ)
00310 Lysine degradation
RGE70_11850 (fadJ)
00380 Tryptophan metabolism
RGE70_11850 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RGE70_11850 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RGE70_11850 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RGE70_11850 (fadJ)
00930 Caprolactam degradation
RGE70_11850 (fadJ)
Enzymes [BR:
syou01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RGE70_11850 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RGE70_11850 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RGE70_11850 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
WOT04027
UniProt:
A0ABZ0JUN4
LinkDB
All DBs
Position
complement(2782807..2784927)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKTFNLERREDGIAILTMDVPGETMNTLRSEFGTEISEMLVDIKADNSIKGLVITSGKE
DSFVAGADISMLDGCETAMDAKILSQQGHVVFNELENLAIPVVAAINGPCLGGGLELALA
CHQRVCSLDSKTMMGVPEVQLGLLPGGGGTQRLPRLVGITTALDLMLTGKQVRPKQALKM
GLVDDIVPATILMRTAIEMALAGKRSAKKKKQSVINKMLEGTSAGRNIIFDQAAKQVAKK
TLGNYPAPEKIIDCVRQGMTKGLIKGLEVEASHFADLVMTNESKALRSLFFATTEMKKET
GAGDVTPRKIHKAMVLGGGLMGGGIASVTTTKAKIPARVKDISEAGLSNALSYAYKLLDK
GVKRRHMTPAVRDNLMALMTTTTQYTGIKDADIVIEAVFEDLSLKHQMVKDVERECAEHT
IFASNTSSLPIGQIAEAASRPENVIGLHYFSPVEKMPLVEVIAHKHTSAETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQMLLEGQGIDHLDKALVKFGFPVGPITLLDE
VGIDVGAKIAPILTAELGERFKAPSAFDKLLADDRKGRKNSKGFYQYSKKSKSKQVDTSV
YSVLGVTPGQSSDESKIAERCVVQMLNEAVRCLDEGIIASARDGDIGAIFGIGFPPFLGG
PFRYIDSLGPAKLVTLLTAYQAKFGDRFEPAPRLKQMAEDNQYFYK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatttaatttagaacgccgcgaagacggtattgccattctaaccatggat
gtgccgggcgagaccatgaacacgctacgcagcgagtttggcactgaaattagcgaaatg
ctggtggacatcaaagccgataacagtattaaaggcttagtaattacctcgggaaaagaa
gactcttttgtggccggcgctgatatttcgatgcttgatggttgtgaaaccgcaatggac
gcaaaaatactatctcagcaaggtcatgtggtatttaacgagttagaaaaccttgctatt
ccggtggtggccgccataaatggtccgtgtttaggcggaggtttagagctggcgttagcc
tgtcatcaacgtgtgtgtagcttagatagtaaaactatgatgggcgtaccagaggtgcaa
ctaggtttgcttcctggcggtggcggtacgcaacgtttaccgcgtttagtcgggatcaca
actgcattagatttaatgctaacaggcaagcaagttagacccaagcaagctttaaaaatg
gggctggtggacgatatcgttccggcaacgattttaatgcgtaccgctatcgaaatggcg
ttggcaggtaagcgtagcgctaaaaagaaaaaacagtcagtgattaataaaatgctggaa
ggcaccagtgctgggcggaatattatttttgaccaagcggcaaaacaagtcgccaagaaa
acgctaggcaactatccagcgccagaaaaaatcatcgattgtgttcgccaaggcatgact
aagggcttaattaaaggcttagaagttgaagcgagtcattttgctgacttggtgatgaca
aatgagtcaaaagcgcttagaagtttattttttgcgaccacagagatgaaaaaagagacc
ggcgctggcgatgtaacaccgcgcaaaattcataaagcgatggtccttggtggtggctta
atgggtggtggtatcgcgtctgtgaccacaactaaagccaaaataccggcaagagttaaa
gacattagtgaggctgggttaagtaacgcgttatcttatgcctataaactattagataag
ggggttaagcgtcgacatatgaccccagctgtacgcgacaatctaatggcattaatgacc
acgaccacacaatacaccggtataaaagatgccgacattgtgattgaagcggtctttgaa
gacttatcgcttaagcaccaaatggtgaaagatgttgaacgagaatgcgctgagcacacc
atctttgcctctaatacttcatcgttaccgattggacaaattgccgaagcggccagccgt
cccgagaatgttattggcctacattacttttcaccggtagagaaaatgcctttggttgaa
gtgattgcccacaaacacacttcggctgagaccattgcaaccacggtggcttttgcacgt
aaacaaggtaaaacgcctatcgtagtgcaagacggtgcgggtttttatgttaaccgtatt
ttagcgctatacatgaatgaagcagcgcaaatgctattagaagggcaaggcattgatcat
ttagataaagccttagttaagtttggtttccccgttggtccaattacattactcgacgaa
gtgggtattgatgttggtgctaaaattgccccgattttaacggctgagttgggcgagcga
tttaaagctccaagtgcgtttgataaattattagcagatgatagaaaaggccgaaaaaac
agtaaaggtttttatcagtacagcaagaagagtaaatcaaaacaagttgataccagcgta
tacagcgtactgggcgtgacgccaggacagagcagtgatgaaagtaaaattgctgaacgc
tgtgtggtgcagatgcttaacgaggccgtaaggtgcttagatgaaggcattattgcgagt
gctcgagatggtgatataggtgccatatttggtattgggttcccgccgttcttaggtgga
cctttccgatatattgacagcttaggccctgcaaaattagttactctattaacggcttat
caagccaagtttggtgaccgatttgaacctgcgccaagacttaaacagatggctgaagat
aaccaatatttctataaataa
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