Shewanella youngdeokensis: RGE70_12160
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Entry
RGE70_12160 CDS
T10660
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K19230
cationic peptide transport system ATP-binding protein
Organism
syou Shewanella youngdeokensis
Pathway
syou01503
Cationic antimicrobial peptide (CAMP) resistance
syou02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RGE70_12160
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RGE70_12160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_12160
Transporters [BR:
syou02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
RGE70_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_22
SMC_N
nSTAND3
oligo_HPY
RsgA_GTPase
AAA_29
AAA_18
DUF87
DnaGprimase_HBD
AAA_16
AAA_23
FtsK_SpoIIIE
NACHT
AAA_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOT04086
LinkDB
All DBs
Position
2858433..2859218
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AA seq
261 aa
AA seq
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MTTPLLKVTDLSKRYNAGYKRFKRQYNQVLSPVSFELNKGETLAIVGEAGSGKSTIARIL
VGAEVRSGGEIYFEGESLEKRDLKQRCRMIRMIFQDPNTSLNPRLTIGELLDEPLKFNTT
LSEKDRRAVVIDKLRKVGLIAEHVDFYPHMISEGQKQRVAVARALMLDPKIIIADEALTA
LDLSVRAQIINLLLELQQEMGLSYIFVSHNMNIIRHVSDKIMVLKKGDLIEKATTEQLFN
APKHEYTQRLMQEQRLFTRKK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacgactccacttcttaaagtgaccgaccttagtaagcgctacaacgctggctataaa
cgttttaagcgtcaatacaatcaagtgttgtcaccagtatctttcgagctaaataaggga
gaaacactcgcgattgtcggggaagcgggttcaggaaaaagtacaatagcccgaattcta
gttggcgcagaagtccgaagtggtggcgaaatatactttgaaggagagtcacttgaaaag
cgcgatttaaagcaacgctgtcgcatgatccgtatgatttttcaagatcccaatacttca
ttaaacccaaggttaaccatcggcgaactactcgatgagcctctaaagtttaataccaca
ttgtcagaaaaagatcgccgagcagtggtgatcgataaattaagaaaagtcggcctgatc
gctgaacatgttgatttttaccctcacatgatttctgaaggacaaaaacagcgtgtagct
gttgcacgagcgctaatgctggatcctaaaatcattattgctgatgaagccctcacggca
cttgatttatcagttcgggcgcaaattataaacctgttactcgaattacaacaagaaatg
ggcctttcttacatattcgtatctcataatatgaacattattcgtcacgtaagtgataaa
ataatggtgttgaaaaaaggcgacttgattgagaaagcaactaccgaacaactgtttaat
gcaccaaagcatgaatacacacagcgactcatgcaagagcaacgtttgtttactcgtaaa
aagtaa
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