Shewanella youngdeokensis: RGE70_12220
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Entry
RGE70_12220 CDS
T10660
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RGE70_12220 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
syou01007
]
RGE70_12220 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syou03016
]
RGE70_12220 (cysS)
Enzymes [BR:
syou01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
RGE70_12220 (cysS)
Amino acid related enzymes [BR:
syou01007
]
Aminoacyl-tRNA synthetase
Class I (G)
RGE70_12220 (cysS)
Transfer RNA biogenesis [BR:
syou03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RGE70_12220 (cysS)
Prokaryotic type
RGE70_12220 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
WOT04095
UniProt:
A0ABZ0JUW1
LinkDB
All DBs
Position
complement(2871442..2872821)
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AA seq
459 aa
AA seq
DB search
MLKLYNSLTRQKEQFVPLQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD
VNFQRNITDVDDKIIKRANENKESCETLTERLIAEMHRDFDSLNMARPDFEPRATLHMPE
IIGMVEKLIARDHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMD
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGDHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDATTVRYFLLSGHYRS
QLNYSEENLKQAKSGLERIYTALKDLDLSVTAAPAEAFVAQFKSAMDDDFNTPEAYSVLF
EMVREINRLKLTDLAQASALGVALKELADVLGILSQDVDTFFKGEGSDDEVAEIEALIVE
RNRARKEKDWPAADIARDGLNALGVILEDGPEGTTWRKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagctttacaatagtcttacccgccaaaaagagcagtttgtgccattacagcca
ggaaagatcggcatgtacgtgtgtggggtgaccatttatgatttgtgtcatattggtcat
ggacgtacttttgtgtcatttgacatgatagttaggtacttgcgatacagtggctatgat
gtcaattttcaacgcaatatcactgatgttgacgacaaaatcattaagcgtgcgaatgaa
aacaaagaaagctgtgaaacattaaccgagcgtttgattgctgaaatgcatagagatttt
gactcgcttaatatggctcgcccagactttgaacctcgtgcaacgctacacatgccagaa
attataggcatggttgaaaagctgattgcacgtgaccatgcttatgttgcgtctaatggt
gatgttctctttagcgtgtcatcgttccctgaatacggccgtttatcaggacaaaactta
gaacagttacaagcgggtgcacgcgttgaagttgaagatagtaaacgcgacccaatggat
tttgttctttggaaaatgtctaagccgggcgaaccaacttgggaatcaccttggggccca
ggtcgccctggttggcacattgaatgttcagcaatgaacagtaaacaccttggtgaccat
tttgacatccatggtggtggtagcgacttacaatttccacatcatgaaaatgaaattgct
cagtcatgctgtgcacatgacactccgtatgttaattactggatgcatacgggcatggtc
atggtcgataaagagaagatgtcaaaatcattaaacaacttcttcactatccgtgatgtg
cttaatcattatgatgcaacgactgtccgttactttttgttgtctggtcattaccgtagc
cagcttaactattctgaagagaacctaaaacaggctaaatcaggtttagagcggatatac
acagcactaaaagacttagatttatcagtgacggctgcaccagcagaagcgtttgtagcg
cagtttaagagtgctatggatgatgactttaacactcctgaagcctattcagtattgttt
gaaatggttcgcgaaattaaccgtcttaaactgactgatcttgcacaagcttcagcttta
ggtgttgcacttaaagaacttgcagacgtattaggcattttatctcaagatgttgatacc
ttttttaagggcgaaggttctgatgatgaagtcgctgaaattgaagcgctgattgtagaa
cgtaaccgcgcacgtaaagagaaagactggccagcggcagacatcgctcgcgatgggctt
aacgcattaggtgtgattttagaagatgggccagaaggcaccacttggcgtaaaaagtaa
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