Shewanella youngdeokensis: RGE70_12305
Help
Entry
RGE70_12305 CDS
T10660
Name
(GenBank) sugar diacid recognition domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syou03000
]
RGE70_12305
Transcription factors [BR:
syou03000
]
Prokaryotic type
Helix-turn-helix
Other families
RGE70_12305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
Motif
Other DBs
NCBI-ProteinID:
WOT04111
UniProt:
A0ABZ0JVB5
LinkDB
All DBs
Position
2892782..2893930
Genome browser
AA seq
382 aa
AA seq
DB search
MYFLNASLAKQIVNRTMKIIGHNINVMNKHGVILGSGEPHRIGEVHEGALLAISQQRTVE
ISRASESTLQGTKAGINLPLHYKGDIIGVIGITGEPAELGHYGELLKMTAEIIVEQANSI
ELAQWQYRQKEEFIIELIKSEGPFSTHQRHLASQLNIDLDTPRVAAIIQVQADAQQTSAN
SILKQILHLLENPSRGNLVAMTSMTELVILKPAFLDGKTWDPTLESDRIDQLIARLPLEM
RQRLKISLGHYFNKPEAINRSYQTALQTLSIGTQMRPEQSKYLYEDFSLLVLMSSLKGNW
RGRELASPYQALLEADKNGQLTKTLTCYLQHFNDQQSCANSLFIHRNTLRYRLEKIEKIT
GCNLQQLDGLLPLYLGQVLLKS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtactttttaaacgcgtcactcgctaaacaaatcgttaatcgcaccatgaaaatcatt
ggtcacaatattaatgtcatgaacaagcacggcgttatattaggttcaggcgagccccac
cggatcggtgaagtgcatgaaggagcattgcttgccattagccagcagcgaacggttgaa
attagccgcgccagcgaaagtacactgcaaggtactaaagcaggcataaacctgccattg
cattacaaaggcgatatcattggtgtgattggcatcaccggcgagcccgcagagctaggc
cattacggtgaactactaaaaatgacggcagagatcattgtcgaacaagccaactccatt
gagctagcgcaatggcaatatcgtcaaaaagaagagtttattattgagctgataaagtca
gaaggaccctttagtactcatcaacgtcatttagcttctcagctcaatatcgaccttgac
accccaagagttgcagccattattcaagtacaagctgacgctcagcaaacctcggctaat
tcaatactcaaacaaattttacacctacttgaaaacccatcacgcggtaacttagtcgcg
atgacatcaatgactgaactggtcattctaaaaccggcctttctagatggtaaaacttgg
gatcccacacttgaaagtgaccgaatcgaccaacttattgcccgcttaccgcttgaaatg
cgccaacgcttaaaaatttcactcggccattatttcaataaacctgaggcgataaaccgc
tcataccaaaccgcattacaaaccttatcaattggcactcaaatgcgccccgaacaaagt
aagtatttatatgaagatttttcattattagtgcttatgtcatctttaaaaggaaactgg
cgcggccgagaattagccagcccataccaagcactgcttgaagcagacaaaaatggacaa
ctaactaaaaccttaacctgctacctgcagcatttcaacgatcagcaatcatgtgccaat
agcctctttattcaccgcaatacgttgcgctatcgactcgaaaaaattgagaaaataacc
ggctgtaatttacaacaattagacggcttattaccgctctaccttgggcaggtcttgtta
aaatcctga
DBGET
integrated database retrieval system
