Shewanella youngdeokensis: RGE70_12365
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Entry
RGE70_12365 CDS
T10660
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
syou Shewanella youngdeokensis
Pathway
syou02010
ABC transporters
syou02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RGE70_12365
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGE70_12365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_12365
Transporters [BR:
syou02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RGE70_12365
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
WOT04123
UniProt:
A0ABZ0JVA6
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All DBs
Position
complement(2912928..2914139)
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AA seq
403 aa
AA seq
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MNKNLLILITILISYSSAVLAAPDVLKVYFDADRTGHIESALSIEQGVKVAFAQADNQLN
GVDVEFVTLDHRGNVGRSKKNMQRFINDNNAIVFVAGFHSPPLIKYREFINESKLLTLVP
WAAGGPITRYPSKDNYVFRLSVDDQKVGEHLVDFAIEQQCKKPHMLLENTGWGKSNHRSI
KAALASNAIEGVSETWFSWGINAAQARLLFETAKQDNIDCIFMVAGAREGALIVNAVADL
DLGISVIGHWGITGGNFAQQVPFETRNKAKLHFVQSCFNFYSSAENEFNKQVFNDAKALF
PEQFIDTNIKAPAGFVHGYDLAKILISSASNVTFTDDIVQNRTAIKQALESLSQPVNGLI
KSYKKPFSEFSQNAPDAHEALGVNDLCMGVYDNMNAVKLIEKQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatctattaatattgataacgatattaatcagttattctagcgcagttttg
gcagctccggacgtcttaaaagtgtactttgatgctgacagaaccggtcatattgaatcc
gcattatcgatagaacaaggcgttaaagtcgcatttgcacaggccgacaatcaactcaat
ggggttgatgttgaatttgtgacactggatcatcgcggcaatgttggtcgcagtaaaaaa
aacatgcagcgctttattaatgataacaatgccattgtatttgttgcaggttttcactcg
ccgccattaattaaatatcgcgaatttattaatgaatctaagcttctcacactggttccg
tgggctgcgggtggcccaattactcgatacccttcaaaagacaattatgtttttcgcctt
tcagtcgatgaccaaaaagtaggtgaacatttggttgattttgctattgagcaacaatgc
aaaaaaccgcatatgttgcttgaaaatacgggttggggaaagtcgaatcaccgcagtata
aaggctgcattggcaagcaacgctatcgagggcgtgagtgaaacctggttttcgtggggg
atcaacgccgctcaagcacgtttattatttgaaacagccaagcaagataacatcgattgc
atcttcatggtggcgggggcgcgcgagggcgcattgattgttaatgcggtcgctgattta
gatttaggcatttcggtgattggccattgggggatcaccggaggcaactttgcacaacaa
gtgccttttgaaacccgcaacaaagcaaaattacattttgttcaatcatgttttaatttt
tatagctctgctgaaaatgaatttaataagcaggtttttaatgacgcgaaagctttgttc
cctgagcagtttatcgataccaatattaaagcgccagcaggttttgtgcatggctatgat
ctggcaaaaatattgattagttcagccagcaatgtgacctttactgacgatatagttcaa
aaccgtaccgccataaaacaggcattagagtcgctatcccagcccgttaatgggttgatt
aaaagctataaaaaaccatttagtgaattttcccagaacgctcccgacgcccatgaagca
ttaggtgttaatgatttatgtatgggggtatatgataatatgaacgccgttaagctcatt
gaaaaacagtag
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