Shewanella youngdeokensis: RGE70_12695
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Entry
RGE70_12695 CDS
T10660
Name
(GenBank) biotin carboxylase N-terminal domain-containing protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00280
Valine, leucine and isoleucine degradation
syou01100
Metabolic pathways
Module
syou_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RGE70_12695
Enzymes [BR:
syou01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
RGE70_12695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
BSH_RND
BT_MCC_alpha
ATP-grasp_LDMS
BSH_CusB
GARS_A
BSH_YknX
BSH_YhbJ
RnfC_N
ATP-grasp_3
BSH_ALG44
RhoGAP
Motif
Other DBs
NCBI-ProteinID:
WOT04186
UniProt:
A0ABZ0JVI6
LinkDB
All DBs
Position
2983914..2986025
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AA seq
703 aa
AA seq
DB search
MLTKLLIANRGEIACRIIKTAQAMGISTVALYSDADIDARHVAMADEAFYLGGSAPTDSY
LKADLIVAIAQEAGAKAIHPGYGFLSENAEFALKCQQNGIIFVGPSAAAIDSMGSKSAAK
AIMASANVPLVPGYHGDEQADDVLVSEANKMGFPVLIKAAYGGGGKGMRIVENSADVLEA
IHSARREAISSFGNDKLLIERYLRQPRHVEVQVFADSHGHCIYLSDRDCSIQRRHQKVIE
EAPAPGLSDALRISMGEAAVAAAKAINYEGAGTVEFLLDTDNSFYFMEMNTRLQVEHPVT
ELVTGQDLVQWQLLVASGRELPLTQAQVHIQGHAFEARIYAEDPQNDFLPACGKLHFLRE
PQQSKFVRIDSGVREKDVISNFYDPMISKLISWDESRPQALQRLVHALSSYQISGLKHNI
EFLANIAQHKAFKAANFSTDFIDRYGESLLGKDISAAAIRQQSTSRETALALAALYQVLA
RQEDAKRCAVNHKDPYSPWGAVNGFRLNSANTHHVALLDDEQQINHLTLTETKLAGRTVY
QLTHHNQASHNTVLSGVLAGDKLHAEITVDNSTAQAFNPAVKHNGHKIKASVSQVDDDFT
LFLYSGSFHFRAIQSEVVEEQDNLDDKLKAPMNGTIVTHLVKVGDTVTAGQGIMVMEAMK
MEYTIESPFNGVVSALFFDTGELVSDGMLLAEVEATSAQAEPA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaaattgctcattgccaaccgcggagaaattgcttgccggatcataaaaaca
gcacaagccatgggaattagcaccgtggcattgtattccgatgccgacattgacgcccga
catgttgctatggctgatgaggcgttttacctcggcggaagcgcgccgaccgactcctat
ttaaaagccgatttaatcgttgcaatagctcaagaagcaggcgcgaaagcgattcacccc
ggctacggttttttatctgaaaacgccgagtttgccttaaagtgccaacaaaatggaatt
atctttgttggccccagtgctgccgcgattgactctatgggcagtaaaagtgcggctaaa
gcaattatggccagtgccaatgtaccgttagtccctggttatcatggcgacgaacaagcc
gatgacgtactggttagcgaggccaacaaaatgggctttccagtattgataaaagcagcc
tacggcggcggtggtaaaggcatgaggattgtagaaaacagcgctgatgtacttgaagca
attcactctgctaggcgcgaagcaattagctcatttggtaatgacaagttattgattgaa
cgttacttacgccaaccccgccatgttgaagtgcaggtgtttgccgacagccatggtcac
tgcatttatctatctgaccgcgattgctctattcaacgtcgccaccaaaaagtgatcgaa
gaagccccagccccagggttaagtgatgcattacgcattagtatgggggaagccgcagtc
gcagcagccaaagcgattaactatgaaggcgctggtacggtggagtttttactcgacacc
gacaacagcttctactttatggaaatgaatacccgattgcaggtcgagcaccccgtcact
gaattggtcaccggacaagatctcgtacaatggcaattgttggttgccagcggccgcgag
ttaccactcacccaagcccaagttcatattcaaggccatgcctttgaagcacgaatttat
gcagaagatccacaaaatgactttttacccgcctgtggcaaactgcactttttacgcgaa
ccgcagcagagcaaatttgtgcgtattgactctggtgtgcgcgaaaaagatgtgatcagt
aacttttacgacccgatgatttcaaaactgattagctgggatgaatcacgccctcaagca
ttgcagcgcctagtgcatgcccttagctcataccaaattagtggccttaaacacaatatt
gaattcttggctaatattgcacagcataaagcgtttaaagccgccaactttagcactgac
tttatcgatcgctatggcgagtcactattgggcaaagacatcagtgccgcggccataagg
cagcagtcaacctcgcgagaaacggctctagcattggctgcactttaccaagtgttagcc
cgtcaagaggacgctaaacgctgcgcagttaatcataaagacccatattcaccttggggc
gcagtcaacggttttaggctcaatagcgccaatacgcatcacgttgctttgctcgatgat
gagcagcaaattaaccacttaacgctaactgaaacgaagctcgcgggccgaacggtctac
cagctaacacaccataatcaagcgtcacacaacaccgtgctatctggcgtgcttgccggc
gataagctacacgccgaaataacagtagacaactcaactgcacaagccttcaacccagcg
gttaagcacaatggtcacaaaataaaagcctctgtcagccaagtagacgatgactttact
ctgtttctctattcaggcagtttccacttccgtgcgattcagtcagaggtagttgaagag
caagacaacttagacgataaactcaaagcgccaatgaacggcaccattgtgacacacctc
gttaaggttggtgacactgtaaccgcagggcaaggcattatggttatggaagcgatgaaa
atggaatacaccattgaatcgccatttaacggtgttgtcagtgcactattttttgatact
ggcgagctggttagcgacggtatgttactcgccgaagttgaagcaacctcggctcaagcg
gagcctgcgtaa
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