Shewanella youngdeokensis: RGE70_12855
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Entry
RGE70_12855 CDS
T10660
Name
(GenBank) H-NS family nucleoid-associated regulatory protein
KO
K03746
DNA-binding protein H-NS
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syou03036
]
RGE70_12855
03400 DNA repair and recombination proteins [BR:
syou03400
]
RGE70_12855
Chromosome and associated proteins [BR:
syou03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
RGE70_12855
DNA repair and recombination proteins [BR:
syou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGE70_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF2018
Motif
Other DBs
NCBI-ProteinID:
WOT04217
UniProt:
A0ABZ0JVA3
LinkDB
All DBs
Position
3023267..3023659
Genome browser
AA seq
130 aa
AA seq
DB search
MSEFLDILTHGRRFKAAVKELSLEELTDLSVKLEKIIEEKAAQAEAETAAQAERNAKIEE
IRKQMEAIGLSVDDIGGAGVKAAPKKRAPRPPKYQIEVAGEMIQWTGQGRMPTVFKNELE
NGRTMEDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatttttagatattttaacccacggtcgtcgttttaaagctgcagtaaaagag
ctatctcttgaagaattaactgacctttctgtgaaactagaaaagatcattgaagaaaaa
gcagcacaagctgaagctgaaacagcagcacaagctgaacgtaatgctaaaattgaagaa
atccgtaagcaaatggaagcaatcgggttatctgttgacgatattggcggcgctggcgtt
aaagctgctccaaaaaaacgcgctcctcgtccacctaaataccaaattgaagttgctggc
gaaatgattcagtggacaggtcaaggtcgtatgccaacagtatttaaaaatgagttagaa
aatggtcgcactatggaagacttccttatttag
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