Shewanella youngdeokensis: RGE70_12945
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Entry
RGE70_12945 CDS
T10660
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
syou03029
]
RGE70_12945 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_12945 (bamA)
Mitochondrial biogenesis [BR:
syou03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
RGE70_12945 (bamA)
Transporters [BR:
syou02000
]
Other transporters
Pores ion channels [TC:
1
]
RGE70_12945 (bamA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
WOT04234
UniProt:
A0ABZ0JV98
LinkDB
All DBs
Position
complement(3045001..3047481)
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AA seq
826 aa
AA seq
DB search
MRLNKIFASMLLVGASFSGNGWAETFQPFEVADIQIEGLQRVALGAALLNLPVKVGDTVD
QLKLQQAIKSLYSSTNFEKIEVLRDGNILVVKVTERPTISSVTFEGNKDIKDEQLQESLD
GSGVKIGESLDRTMLSGIEKGLQDFYYGVGKYGAKVKAEIVNLPRNRVELKFSFTEGLAA
EIRQINVVGNTEFSDEELIGMLELKDYVAWWDLFGERRYQKQMLQADLETIKTYYQNRGY
IRFDVTSTQVAMTPDRKGLYITINVDEGEQYKVKDVKLTGELMGREKLLQAILPIKEGDM
YNGGDVTFTEEMYGKYLGRYGYAYPDVKTYPEIDDETNEVTLNINVNPGKRVYVRNVNFS
GNTITKDEVMRRQLRQMEGAWLNSAQVELSKSNLNRLGFFETVDTETVQVPGTDDLVDIA
FNVKEQPSGSFNAGVGYGTESGLSLQFGVQQSNFLGTGNQAGVNLNTNSYSKSLNVSYTD
PYFTKDGVSLGGSIFWSEFDADEANLEAYKNSSYGISATSGFPINEYNRINGGIGYRHNE
ISEISAYEQAVRFYNIYRDSDDPNAGLGFDNFELTLGWSRSTLNRGTFPSDGSSQRLSGK
VTVPGSDLQYFKADFDTKTYYPIDRNKTFVFLSRARVAYGNGYGKFNDNDQILPFWENYY
SGGSTSLRGFESNSVGPRSFYQYRDSEPCIDPSGSTCTLPGDASSIQVSSGNSIGGNAIV
TASLELIVPTPFLDEAYSNSVRTSFFVDAGNVWDTEFDYDSYRYLPVEEFDKLQDYSDPS
RIRASWGMSVQWISPMGPMVFSLAWPIKEYEDDETEVFSFNIGQTF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaataaaatttttgcctcgatgttattagtcggagcgtctttttcagggaac
ggttgggcagaaacattccaaccatttgaagtagctgatatccaaattgaaggtttgcag
cgggttgcacttggtgctgctctgctaaatctacctgttaaggtaggggatactgttgat
caattaaaattgcagcaagcgataaaaagcttgtattcgtcaactaacttcgaaaaaatt
gaagtcctacgtgacggcaatatactcgtggttaaagtcactgaaagaccgactattagc
tctgttacctttgaaggtaacaaagatattaaagatgaacagttacaagaaagtcttgat
ggttccggagttaaaatcggtgaatcacttgaccgtacgatgctatctggcatcgaaaaa
ggtctacaagatttttactatggtgtcggtaagtatggtgccaaagttaaagcagaaatt
gttaatttaccgcgtaaccgtgtcgaacttaaatttagctttacggaaggcttagcagct
gaaatccgtcaaattaacgttgtaggtaataccgagtttagtgacgaagagctaatcggt
atgcttgagctgaaagattacgttgcatggtgggatctgtttggtgagcgccgttaccaa
aaacagatgttacaagccgatttagaaaccatcaaaacgtattatcaaaatcgtggttat
atccgctttgacgtcacttcaacacaggtcgcaatgacgccggatcgtaaagggctttac
attacgattaatgttgatgaaggtgaacaatacaaggttaaagacgttaaattaaccggc
gaattgatggggcgtgaaaagttacttcaagctattttacctatcaaagaaggcgatatg
tataacggcggcgacgtgacttttaccgaagagatgtacggtaaatatcttgggcgttac
ggctatgcatacccagatgtaaaaacctatcctgaaattgatgacgaaacaaatgaagtt
acgctaaacattaatgtcaaccctggcaaacgtgtctatgtacgtaacgttaacttctct
ggtaacacaattactaaagatgaagtgatgcgtcgtcaattacgtcaaatggaaggggct
tggttaaactctgctcaagttgagttgtcaaagtctaacttgaaccgtttaggctttttt
gaaactgttgatactgaaaccgttcaagttccaggtactgatgacctagttgatattgct
tttaacgttaaagagcagccatcgggctcgtttaatgccggcgttggttatggtactgag
tcagggcttagcttgcagtttggcgtgcagcaaagcaacttcttggggacgggtaaccaa
gcgggtgtgaatttgaataccaactcgtattcaaagagccttaacgtgtcatatacggat
ccttacttcactaaagatggtgtaagtttaggcggcagtattttttggagtgagtttgac
gcggatgaagctaaccttgaggcctataaaaatagctcttatggtatttcggcaacatca
ggttttccaattaatgaatataaccgcataaacggtggtattggttaccgtcataacgaa
atttctgaaatttcagcttacgaacaagctgtacgtttctataatatttatcgagattct
gacgaccctaacgcaggcttaggtttcgataactttgaattgaccttaggttggtcacgc
agcacgttaaaccgtggtacgttcccgtcagatggttcgtcacagcgcttgagtggtaaa
gtgacggtaccagggtctgatttacagtattttaaagcagatttcgacaccaagacatat
tatccaattgacagaaataaaacgtttgtgtttttatcgcgtgccagagttgcttacggt
aatggttatggcaagtttaatgataatgaccaaattttaccgttctgggagaactattac
tccggtggtagtacgtcactacgtggttttgaatcaaattctgtagggccgcgctctttc
tatcagtatcgtgatagtgagccatgtatcgatccttcaggcagtacgtgtacgttaccg
ggtgatgcaagttctattcaagttagctctggtaactcaattggtggtaacgccattgtt
actgcaagtttagagttgattgtacctacgccatttttagatgaagcgtacagcaactca
gttcgaacaagcttctttgtcgatgcaggtaacgtatgggatactgagtttgactacgat
tcttatcgttatcttccagttgaagagtttgataaacttcaagattatagcgatcctagc
cgtattcgtgcctcgtgggggatgagcgtgcaatggatatcgccgatgggacctatggtg
tttagtcttgcatggccgattaaagaatacgaagatgatgaaacagaagtcttctcattt
aatattggccagactttctaa
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