Shewanella youngdeokensis: RGE70_13265
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Entry
RGE70_13265 CDS
T10660
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
syou02044
]
RGE70_13265
02035 Bacterial motility proteins [BR:
syou02035
]
RGE70_13265
Secretion system [BR:
syou02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RGE70_13265
Bacterial motility proteins [BR:
syou02035
]
Pilus system
Pilus assembly proteins
RGE70_13265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF8355
T4P_PilY1
PD_1611-like_2nd
Motif
Other DBs
NCBI-ProteinID:
WOT04290
UniProt:
A0ABZ0JVF5
LinkDB
All DBs
Position
complement(3108064..3111585)
Genome browser
AA seq
1173 aa
AA seq
DB search
MNIKRFIIAMASALVMMSGFSHGDDTELYVFESSSRSGDRPQVLIIFDNSGSMDTWEYTE
ELYDRGESLKSSTKLYYAKGGGAVPEPSSTNFFKNKVNGCKASKEYLKGYGFFTGSVREY
KFIGDNGTWSELPDTLGGTLTLVDCFEDFSNEDDLRFQNTNDYYPGFPVDSLGSPDSPEP
YTYAKENTSSAEDIQAAIDSAYLTDFGTGESVTVYTENYVNWYHSNKSKTWMTRMAIAQR
VIEDTVVTTPSVDFGLAVFNINSREGSEGGRVISGIKRLQSSEKTDFIEMVNGLDAETNT
PLCETLYEAYRYFSGGKVYFAKTARNISPDRDTDIESGSSYDSPFESSQCSNRAYVVYIT
DGSPTADDDANKLVKAMDGYKSSEVVDSSYLPALASIMYRKDVNPSLEGDQFVSTYTIGF
SDGADDAAPILSKTAELSGAEYFAAKDATQLQAALQDVFAQILEVNSSFTSPSVATNNFD
RTQTFDSVYYSMFLPNKGPRWQGNLKKFKVNSDGEIIDKNGASAIGDDDNLSDSACSYWT
PNSVCSASSGGGDGNNVGTGGVLHELRTGASRTLYGDFGSNGALAEFSKSMASSRAGGDT
NLASYMGVSKSSLSTYFDWAKGKDTDDEDGDSSTSDPRDDIFGDPLHSKPLAINFGTADA
QDVRVLVGTNHGFLHMFKDEGDSVSESWAFMPYELLPNLPELKANVPTGVHSVYGLDSPP
ISYVKTATSGAIEKAWVFVGMRRGGKSYYALDITNPDKPKFMWKIDSNSSGMGELGQSWA
EPVVTYIPGWPAGNTDIASAKPVLIFGGGYSPATKDSSAIGIADTQGRAVFIVDAESGKL
IHSFGPTSSATMTALPGIADSIPNSVAVLDSNGDKLTDRIYATDTGANVWRMDLPSTSPS
DSTAPWTAFKFAELGNSSLESDRRFFAEAAVAQTTFTNVSEVSVTVGDKTTTSITYQSVP
YDAVVVGTGNRPHPLGVLRSDKFFALQDRNVVSKSFNGIGDNTVPAVISMNSLYNVSSKA
PSTEAENVTFSTKRGWYYDYVTEGEKSLSAATIIQGRVFFSTYVPGDEVADNQCLVSGGS
RLYGFDLHRGTRAFTKEYIEMGDSIPDTPQLVIPPDGDNMYLIGIGNAGDDIEFKECAEG
SVDCPAAPECGSGNSQCVGGGLEVNKIYYHVND
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaacgatttattatcgcaatggcaagtgcgcttgtcatgatgtctggtttt
agtcatggtgatgacaccgaactgtacgtatttgaatcatcttcacgttcaggggatcgg
ccacaagtactgattatttttgacaattccggcagcatggacacgtgggaatatactgaa
gagctttatgaccgcggtgagtcacttaaatcgagtactaaactttattatgccaaaggg
ggcggggctgttcctgaaccgagtagcacaaatttttttaaaaacaaagttaatggctgt
aaagcatcaaaggagtacttgaaaggctatggcttttttaccggttccgttcgcgagtat
aaatttataggtgataacggtacatggtcagagttacccgacacattgggtgggactttg
actcttgttgactgttttgaagacttttcaaatgaagacgatttacgctttcaaaatacc
aatgactattacccaggctttcctgttgatagtttagggtctccagatagtcctgaacct
tatacttatgccaaggaaaacacatcgtctgctgaggacattcaagctgctattgatagc
gcctatctgacggattttgggactggtgaatcggttacagtttatactgaaaactatgtt
aattggtaccattcgaacaagagtaaaacatggatgactcgaatggcgattgcgcagcgg
gttattgaagataccgtggtaactactcctagcgttgattttgggcttgctgtctttaac
attaactctagagaaggctctgaaggtggacgagttatctcaggtattaagcgtttacag
tcatcagaaaagactgattttatagaaatggtcaatggtttagatgctgaaacgaatact
ccattgtgtgaaacgctgtatgaggcgtatcgatatttttctggcgggaaggtctatttt
gcaaaaacggcaagaaatatatcacctgatcgagacactgacatagaaagtggcagtagt
tacgactcaccttttgaaagtagccagtgttcaaatcgggcctatgtggtttacattact
gatggttcgccaactgcagatgatgatgcaaataaattggttaaggcgatggatggttac
aaatcatctgaagttgttgatagtagttatttgcctgctttggcaagcattatgtaccgc
aaagatgttaacccaagccttgaaggagatcagtttgtctccacttatacgattggtttt
agtgatggcgctgatgatgctgcgccgattttaagtaaaacggcggaacttagtggtgct
gagtattttgcggcaaaagatgccactcaattacaggcggcactgcaggatgtttttgcc
caaattttagaggttaactcaagttttacctctccgtctgtagcaactaataattttgat
agaacccagacgttcgactcagtttattattcaatgttcttgccaaataaaggccctcgt
tggcagggaaatcttaaaaagtttaaagtaaatagcgatggcgaaattattgataaaaat
ggtgcgagcgctattggtgatgacgataatttgagtgatagtgcctgctcctattggact
cctaattctgtttgtagcgctagtagtggtggtggcgatggcaacaatgttggtactggt
ggtgttttacatgagttgcgaacaggcgctagccgtactttgtacggtgattttggttca
aatggggcgctggctgaatttagtaaaagcatggcgtcttcaagagctggtggagatacc
aacttagcaagctatatgggggttagtaagtcaagtctatcgacttattttgattgggct
aaaggaaaagatactgacgatgaagatggtgattcatctacatctgaccctcgtgatgac
atatttggtgatccactgcattcgaaaccactggcaataaattttggcactgcagacgct
caagatgttcgggtgctcgttgggactaatcacggctttttacatatgttcaaggatgaa
ggtgatagtgtgtcagagtcctgggcgtttatgccatatgagttgttgcccaaccttcct
gaactaaaagcgaatgtgccaactggcgtgcattcagtatatgggcttgatagcccacct
atctcatatgttaaaaccgcgaccagtggtgcaattgaaaaggcttgggtatttgtaggc
atgcgtcgtggtggtaagtcctattatgcgttagatattacgaacccagataaacctaaa
tttatgtggaaaatcgactccaacagctctggtatgggggagttagggcaatcttgggca
gagccggtggtgacctatattcctggttggcctgctggcaacaccgacattgccagtgca
aagcctgtactgatattcggcggcggatactcgcccgcgacgaaagatagttctgcaatc
ggtattgcagatactcaaggtcgggctgtatttattgttgatgctgagtcaggaaaatta
attcattcatttgggcctacttctagtgcaactatgacagcgcttccaggaattgctgat
agcatccctaactcagttgcagtgcttgatagtaatggtgataaactaaccgacagaatt
tatgctacagataccggtgcgaacgtttggcgtatggacttaccaagcactagtcctagt
gactctactgccccttggacggcatttaaatttgcggaactaggtaatagttcattagag
tcagatagacgcttttttgcagaagctgcagtggcacaaactacatttaccaacgtgtca
gaggtaagtgttactgtcggtgataaaaccacaaccagcatcacttatcagagtgtacct
tatgatgcagttgtggtgggtactggtaatcgaccacaccctttaggtgtattgcgcagt
gataagttctttgctttacaagatcgtaatgtggtgtctaaatcatttaacggcattggc
gataatactgttccggcagtgattagcatgaatagcttgtataatgtttccagtaaagcg
ccctccacagaggctgaaaatgtcaccttttcgactaagcgaggttggtattatgactat
gtgaccgagggcgaaaaaagcctttctgctgcgacgattattcagggtagggtatttttc
tctacttatgtacccggtgatgaagttgccgataaccagtgtttagtatcggggggaagt
aggctttatggattcgatttacatagaggaacccgcgcttttactaaagaatacattgag
atgggtgatagcattccagatacaccgcagctagttatcccgcctgatggcgataatatg
tacctaataggtattggtaacgcaggcgatgacattgagtttaaagagtgtgccgaaggc
agcgtagattgtccagcagccccagaatgcggctctggcaatagtcaatgtgttggtggt
gggcttgaagtgaacaagatttattatcacgttaatgattag
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