Shewanella youngdeokensis: RGE70_14400
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Entry
RGE70_14400 CDS
T10660
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_14400
Enzymes [BR:
syou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RGE70_14400
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGE70_14400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WOT07033
UniProt:
A0ABZ0K3G3
LinkDB
All DBs
Position
complement(3369056..3369757)
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AA seq
233 aa
AA seq
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MQSKRARLDRFISATTGINRKHVRLLLAKGLVEVDGKVARDIDQIIDQFSHICLEGKVLR
ANAPSYVMLHKPIGVVSATVDDKHKTVIDLLTRADKTQLHIVGRLDLNTSGLLLLTNDSR
WSKRLMSPEHKVAKLYRVTLQNPLDPTYVDAFAKGMYFGYEDITTAPAKLEIVDSHTALV
TLIEGRYHQIKRMFGRFRNPVVALHRISVGDIVLDPQLAVGESRELTPAEVNA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctaaacgggcacggttagaccggtttatcagtgcaacgactggaataaaccgt
aagcatgtgaggctgttgttggctaaaggcttagttgaggttgacggtaaagtggcccgc
gatattgaccaaattattgatcagttttcgcatatttgtttagaaggcaaagtgcttcga
gctaacgccccgagttatgttatgttgcacaagcccatcggtgtggtgagcgcaaccgtt
gatgataaacataaaaccgtcattgacctgctaacacgggccgataaaacacaactgcac
atagtgggtcggttagacttaaatacctcaggtttattgctgttaaccaacgatagtcgc
tggtcaaagcgcttaatgtcaccagagcacaaagtggcaaagttgtaccgcgttacctta
caaaatccattagatcccacttatgtcgatgcgtttgctaaagggatgtattttggctac
gaagatatcactactgctccggcaaagcttgaaattgtcgactcacacactgcactcgtt
accttaatcgaggggcgctaccaccaaataaaacggatgtttggccgttttcgcaatccg
gtagtagcactgcaccgaatttcggtgggcgacattgtgctcgatccccaactagcagta
ggcgaaagtcgcgaattaacccccgctgaggtgaacgcctag
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