Shewanella youngdeokensis: RGE70_14525
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Entry
RGE70_14525 CDS
T10660
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
syou Shewanella youngdeokensis
Pathway
syou03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGE70_14525 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syou03400
]
RGE70_14525 (ung)
Enzymes [BR:
syou01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RGE70_14525 (ung)
DNA repair and recombination proteins [BR:
syou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGE70_14525 (ung)
Prokaryotic type
RGE70_14525 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WOT04528
UniProt:
A0ABZ0JWG7
LinkDB
All DBs
Position
complement(3390602..3391270)
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AA seq
222 aa
AA seq
DB search
MPIDPSWNCFIQTQQQQDYFTQLQTFVDGERAAGKVIYPPADQVLAAFEHTPLNKVRVVL
IGQDPYHGPNQAHGLCFSVQKGVKVPPSLVNMYKELATDIEGFTTPEHGNLLPWAQQGVL
MLNTVLTVEQGQAHSHAKSGWETFTHNVLLHLNEQPQPIIFVLWGAHAKKKGKVITAAQH
KIVAGPHPSPLSAYRGFFGCKHFSQVNQLLVEHGGAPINWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcgacccaagctggaactgctttattcaaacgcagcagcaacaagactatttt
acccagttacaaacatttgttgatggcgagcgcgccgctggcaaagtgatttatccgcct
gcagaccaagtgctcgctgcgtttgaacatacgccgcttaacaaggtgagagtcgtgctg
attggacaagacccttatcacggccctaatcaagctcatggactgtgtttttcggtgcaa
aaaggggttaaagtgccaccgtctttggtcaatatgtacaaagagttagccaccgacatt
gaaggctttaccacgccggaacatggcaacttactgccttgggcgcagcaaggggtatta
atgcttaatactgtgcttaccgttgagcaagggcaggcgcattctcatgctaagtctggc
tgggaaacttttacccacaatgtattactgcaccttaacgagcaaccgcaaccgattatt
tttgtgctttggggcgcgcatgctaaaaagaaaggtaaggtgattaccgccgcgcagcat
aaaatcgttgctggcccgcatccgtcaccattatccgcttaccgtggtttttttggttgt
aagcacttttcacaggtaaaccaattattagttgagcatggtggagcgccgattaactgg
caggtttaa
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