Shewanella youngdeokensis: RGE70_15030
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Entry
RGE70_15030 CDS
T10660
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
syou Shewanella youngdeokensis
Pathway
syou03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RGE70_15030 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syou03019
]
RGE70_15030 (orn)
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_15030 (orn)
Messenger RNA biogenesis [BR:
syou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RGE70_15030 (orn)
Ribosome biogenesis [BR:
syou03009
]
Eukaryotic type
Pre-60S particles
RNases
RGE70_15030 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WOT04617
UniProt:
A0ABZ0JXN1
LinkDB
All DBs
Position
complement(3494196..3494741)
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AA seq
181 aa
AA seq
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MTINENNLIWVDLEMTGLEPAVDRIIEIATIVTDKELNIIAEGPVIAIHQSDEQLALMDD
WNQKHHGESGLVDRVKASPFSEDDAIKQTIEFLSQYVPAGKSPMCGNSIGQDRRFLNRYM
PALEDYFHYRNIDVSTIKELVRRWEPSAMEGFTKQNTHQALLDIQESIAELQFYRAKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactataaacgaaaacaaccttatttgggtcgatcttgaaatgacagggcttgagcct
gcagttgatagaattattgaaatagctactatagtgactgataaagagttaaacattatt
gccgaaggtcccgtcattgctattcatcaaagcgatgaacagctggcactgatggatgat
tggaaccaaaagcaccatggtgagtcaggactggtcgaccgtgttaaggcgagcccgttt
agtgaagatgatgcgattaagcagacgattgaatttttgtctcagtatgttccagcaggt
aaatcaccaatgtgtggcaatagtattgggcaagatcgccgatttttaaatcgctatatg
ccagcacttgaagactattttcattaccgaaatatcgacgttagtacaataaaagagctt
gttcgtcgttgggaaccatcagctatggaaggtttcactaagcaaaatacacatcaagct
ctactcgatattcaagaatctatagctgaattgcagttttatcgagcaaaagtatttaaa
atttaa
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integrated database retrieval system
