Shewanella youngdeokensis: RGE70_16500
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Entry
RGE70_16500 CDS
T10660
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syou03000
]
RGE70_16500
03036 Chromosome and associated proteins [BR:
syou03036
]
RGE70_16500
Transcription factors [BR:
syou03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RGE70_16500
Chromosome and associated proteins [BR:
syou03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RGE70_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HTH_5
HTH_IclR
HTH_20
HTH_Crp_2
MarR_2
HTH_11
DUF7343
Fe_dep_repress
HTH_36
HTH_34
HVO_A0114
HTH_1
TrmB
LexA_DNA_bind
Rrf2
Linocin_M18
HTH_28
HTH_DeoR
HVO_A0261_N
Crp
HTH_23
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
WOT04890
UniProt:
A0ABZ0JX58
LinkDB
All DBs
Position
3853688..3854173
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AA seq
161 aa
AA seq
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MADLQLDKIDLHILKLVQQYGKLSNQELAEKVGLSPSPCSRRVKALEEAGYIAGYATLLS
PAHFDLALTAYIQVRLEKHTSEILEGFEAKIASYDEVQECCLLTGSDADYQLKVLVKDMH
AFKVFLLDKLTTNEQIAGVHSSFVLKQVKNQTQIPLPPSAN
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctgcaattagacaaaattgatctgcacattcttaaattagtgcagcagtat
ggcaagctgtctaaccaagaattagccgagaaagtcggcttatcgccatcaccttgctca
cgcagagtaaaagcattagaagaagccgggtatattgcaggatatgccactttattaagc
ccggcacactttgaccttgcgcttaccgcctacattcaagtgcgcctagaaaagcatacc
agtgagattttagaaggtttcgaagctaaaatagcctcttacgatgaagttcaagaatgt
tgcctgctcaccggcagtgacgccgattaccaattaaaagtactggtcaaagacatgcac
gcctttaaggtttttctactcgacaagctcaccaccaacgagcaaatagccggcgtacac
tccagctttgtccttaagcaggttaaaaaccaaacccaaatcccgttaccaccgtcagca
aactaa
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