Shewanella youngdeokensis: RGE70_17040
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Entry
RGE70_17040 CDS
T10660
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00300
Lysine biosynthesis
syou00550
Peptidoglycan biosynthesis
syou01100
Metabolic pathways
syou01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGE70_17040 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGE70_17040 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RGE70_17040 (murF)
Enzymes [BR:
syou01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RGE70_17040 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Glyco_hydro_42C
Motif
Other DBs
NCBI-ProteinID:
WOT04978
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Position
complement(3989871..3991238)
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AA seq
455 aa
AA seq
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MITLSLAELAQHLGGRLHGEDRIIEQVSSDSRNVCAKTLFVALKGDNFDGHQFVASAAEA
GVKAVLVERELPLDVSQIIVANAQRAMGSIGAYIRDKLSPVCVALTGSNGKTSVKEMVAT
ILSQQFKVLYTAGNFNNEIGVPLTLLRLEAGDQFGVFELGANHAGEIDYTSSLVKPRVAM
VNNVASAHLEGFGSLAGVAKAKSEIFNHVMADGTAVINADDAFAAVMLTASKHLTQLTFA
IDADANVKATALQADKSGRYRFNINYNGQIESVVLPLAGRHQVLNALGATSICLALGLTL
SRICQGLALLQPVKGRMLPVSFGRVTVIDDSYNANPASVGAAIDWLQKIQGNRCLVLGDL
GELGDNAALLHSELGKEAKTKGVDALFCVGELSESASVAFGATHHNDIKELTAELITYIN
SLPEDITILVKGSRSAKMERVVEALTMAFGRGEFV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgataacgttatcactcgctgaactggctcagcaccttggtggccgcctgcacggcgaa
gatcggatcattgaacaggtttctagtgatagccgtaatgtgtgcgctaaaacactgttt
gttgctttaaaaggcgataattttgacggccatcagtttgtggcctcagctgccgaagct
ggcgtaaaggcggttttggttgagcgtgagctaccgctagatgtgtcgcagattattgtc
gctaacgctcagcgagctatgggtagtatcggcgcatatatacgcgacaagttgtcacct
gtgtgtgtggcgttaactggctcaaatggcaaaactagtgttaaagagatggtcgcaacg
attctatctcagcaatttaaggtgctgtataccgcgggtaacttcaataacgaaatcggc
gtgccgttgacattattgcgcttagaggccggcgatcagtttggcgtgtttgaattaggc
gccaatcatgccggtgaaattgattacacctctagcttggttaagcctcgcgtggcgatg
gtaaataacgttgcctctgcccacctagaaggttttggatcgttagctggagtcgctaaa
gcaaagtctgaaatctttaaccatgttatggcggacggcaccgcggtgattaatgccgat
gatgcgtttgcggcagtgatgcttactgcatcgaagcacttaacccaactgacatttgct
atcgatgccgatgcaaatgttaaagcaacggcactgcaggcagataaaagcggtcgatac
cgtttcaatattaactacaacggacaaatagaatcggtagtgttaccgctagctggacgt
catcaagtgcttaatgcattaggggcgaccagtatctgtttggcattaggcttgacgtta
agccgtatttgccaaggtttagctttattgcaaccagttaaaggcagaatgctccccgtc
agttttggccgggtgactgtgattgatgacagttacaacgccaatcccgcctcggtagga
gctgcgattgattggcttcaaaaaattcaaggaaatcggtgtttagttctgggcgattta
ggcgaattaggcgacaatgctgcccttttgcacagtgagctcggtaaagaagctaaaaca
aaaggtgttgatgcactattttgtgttggcgaactgagtgaaagtgcaagtgttgctttt
ggagctacacatcataatgatatcaaggaattgacagcagaattaatcacttatattaat
agtctgcctgaagatatcaccatattagtgaaaggctcgcgcagtgcgaaaatggaacgt
gtagttgaagctttaacaatggcctttggtcgcggggagtttgtttaa
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