Picosynechococcus sp. PCC 7002: SYNPCC7002_A0485
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Entry
SYNPCC7002_A0485 CDS
T00664
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syp
Picosynechococcus sp. PCC 7002
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syp03016
]
SYNPCC7002_A0485 (truB)
Enzymes [BR:
syp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SYNPCC7002_A0485 (truB)
Transfer RNA biogenesis [BR:
syp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYNPCC7002_A0485 (truB)
Prokaryotic type
SYNPCC7002_A0485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACA98492
UniProt:
B1XPD5
LinkDB
All DBs
Position
complement(516182..517123)
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AA seq
313 aa
AA seq
DB search
MNQQRTGSAFSGWGFINLQKPAGWTSHDCVGKLRRLLGLKKIGHGGTLDPMATGVLPIAV
GKATRLLQYLPKQKSYQGIVRFGVKTTTDDLEGEVITQKACSTLTLAEIQRVLPDFFGTI
TQIPPAFSAIQRDGKRLYELARQGIAVDVPSRQVEIYDLQIKAWQPGDFPELTLEICCGE
GTYIRAIARDLGERLGVGATLAGLTRTRSGGFDLEESISLEDIAAQRETGVFACLEPDQA
LAHLPAVVLNEAQVTQWSYGQKISWDVALADPLGEPLAVYDQAHNCLGVGEFRPSKDNPH
ERVLAGRVVLIGR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcagcaacggacaggatcagcctttagcgggtggggctttattaacttgcaaaaa
ccggctggctggacttcccatgattgtgttgggaaactgcggcggcttctgggcctcaaa
aagattggccatggtggtaccctcgatccgatggccacgggggttttgcctattgcggtg
ggtaaggcaacgcgtcttttgcaatatctgccgaaacaaaaaagttatcaagggattgtc
cgctttggggtcaagacaaccacggatgacctagaaggggaagtaatcacccaaaaagct
tgtagtaccttaactttggcggagattcaacgggttttaccggactttttcggtactatc
acccaaattcccccagcctttagcgcgatccagcgggatggcaaacgattatatgagctg
gctcgccaaggcattgcggtggatgtgcctagtcgtcaggtagaaatttatgatttacaa
attaaagcgtggcaaccgggggatttcccggaactaaccctagagatttgctgtggggaa
ggaacttacattcgggcgatcgccagggatctcggtgaacggttgggggtcggagccacc
ttagcgggtttaacgcggactcgcagtggcggttttgacctagaggagagtattagccta
gaagacattgccgcccagcgggaaacgggagtatttgcttgcctcgagccggatcaagct
ttggcccatttgccagctgtcgttctgaatgaagcccaagtaacccagtggagttatggg
caaaaaattagttgggatgtggccttggctgatcccctgggggaacctctggctgtctat
gaccaggcccataactgtctcggtgtgggtgagtttcgtcccagtaaagataatccgcat
gaacgggttttggcggggcgagtagtcttaatcggtcgctag
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