Picosynechococcus sp. PCC 7002: SYNPCC7002_A0531
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Entry
SYNPCC7002_A0531 CDS
T00664
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase II PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03420
Nucleotide excision repair
syp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SYNPCC7002_A0531 (pcrA)
03430 Mismatch repair
SYNPCC7002_A0531 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A0531 (pcrA)
Enzymes [BR:
syp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNPCC7002_A0531 (pcrA)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYNPCC7002_A0531 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SYNPCC7002_A0531 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
DEAD
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ACA98538
UniProt:
B1XPI1
LinkDB
All DBs
Position
561404..563770
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AA seq
788 aa
AA seq
DB search
MSDLLAQLNPSQRRAVEHFCGPLLVVAGAGSGKTRALTFRIAHLIRNHRVDPENILAVTF
TNKAAREMKERVELLYAQQLAELQHGKPLGGLPEFEQKKLRSQVYKQVTKQLWIGTFHSL
CARILRYDINKYQDERGRTWQRNFTIMDDSDVQTLIKRIVTQQLNLDDKKFNPRTIRYQI
SNAKNLGLTPNDYARQQGGYKGKVVAEVYEAYQTALAANNSLDFDDLILIPVRLFQQNES
ILGYWHSQFHHILVDEYQDTNRIQYELIRLLSTNGETNQAALGWHNRSLFVVGDADQSIY
SFRMADFTILLEFQENFGDRLPDDETQTMVKLEENYRSRENILKAANALIEQNSQRIDKV
LKATRGAGEEIYCHKADNENEEARFVLNQILGLRRKNPELDWGDFAILYRTNAQSRPFED
LLIRNNIPYQVVGGFKFYDRKEIKDALAYLKAIANPADTLSLMRVINTPKRGIGKTTVDK
LNHAAQELGCPLWEILSDETSVATIAGRAARKINEFAGLIQEMQGKMATMRGADILDYVM
ENSGYIDDLKMQGTEEADSRVENISELYNAMLQFQDENEDSSLNGFLENASLASDLDDLN
DESQQVSLMTLHSAKGLEFPVVFLVGLEQGLFPHTRSLNDPVALEEERRLCYVGLTRAQE
QLFLSYTRERYMWGYREPAVASQFLAELPQELVTSNGRSPAPMPPKQEPKMMSISQKQRS
QKRRERQAARTEVAQQKWDIGDRVHHNVFGEGEVIKIFGDDKKTNLAIQFPNLGKKIIDP
RVAPMKKL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttgttagcccaactcaacccctcccaacgtcgtgctgttgaacatttttgt
gggccactcctggtggtggccggggctggctcaggcaaaaccagggccttgacgtttcgc
attgcccatttgattcgcaaccaccgtgttgatccagagaatattctggccgtcaccttt
acgaacaaggctgcccgcgaaatgaaagaacgggtagaactgctctatgcccaacagctc
gcagaactgcaacatggtaaacccctgggagggctgccggagtttgagcaaaaaaaattg
cgatcgcaggtttacaagcaggtgacaaaacagctctggattggcacgtttcacagcctc
tgcgcgcgaattctccggtacgacatcaacaaatatcaggacgaacggggccgcacctgg
cagcgcaatttcacgatcatggacgatagcgacgtccaaacattgatcaaacgcattgtc
acccagcaactgaacctagacgataaaaaattcaatccccgcaccatccgctatcagatt
agtaatgccaaaaacctcggccttacccccaatgactatgcccggcagcagggaggttac
aaagggaaagttgtcgcggaggtttatgaagcctatcaaacggccttggcggcgaataat
tccctcgattttgatgatttaattctgatcccagtgcggttgttccagcaaaatgaatcg
atcctcggttattggcacagtcaatttcaccatattcttgtggatgagtatcaggataca
aaccggattcagtatgagttaattcggctactcagtaccaatggcgaaacaaaccaggcc
gctttgggttggcataatcgctctttgtttgtggtaggggatgcggatcaatccatttat
tcgtttcggatggcggacttcacaatcttgctggaattccaagaaaattttggcgatcgc
ctccccgatgacgaaacccagacgatggttaagttggaggaaaattaccgctcccgggaa
aatattctgaaagccgccaatgccttgatcgagcaaaatagccagcgcatcgataaagtg
ctcaaggccacccggggcgctggagaggaaatttattgccacaaggcggataacgaaaac
gaagaagcgcgattcgttttaaatcaaatcctcggtctgcggcgcaaaaatccagaactc
gactggggcgactttgcgatcctctaccgcaccaatgcccaatcccgcccctttgaagat
ctcctgattcgtaacaatattccctaccaagtggtgggcggcttcaaattctatgaccgc
aaagagattaaagatgccctcgcttacctcaaggcgatcgccaaccctgccgataccctg
agcctgatgcgggtgattaatactcctaagcggggcatcggcaaaaccaccgtcgataaa
cttaaccacgccgcccaagaattaggctgtcctctctgggaaatcctcagcgatgaaacc
tctgtagccaccatcgctggacgggcggcccggaaaatcaatgagtttgctgggctaatc
caggaaatgcaaggcaaaatggcgaccatgcgcggtgccgatatcctcgattatgtgatg
gaaaattccggctatatcgatgatttaaaaatgcaaggtactgaagaagccgatagtcgt
gtggaaaatatttccgagctttacaatgcaatgctgcaattccaagacgaaaacgaagac
agcagcttaaatggctttctggaaaatgcgtccctcgcttcggatctcgatgacctcaat
gatgagtcccagcaggtttctttgatgacgctccattcagccaagggtttggagtttccg
gtggtctttttggtagggctagagcaggggctatttccccatacccgctccttaaatgat
cccgttgctttagaagaagaacggcggttgtgttacgtgggcctgacccgcgcccaggag
caattattcctcagctataccagggagcggtatatgtggggttatcgagagcctgccgtt
gcctcgcaatttctcgcagaactcccccaggagttggtaacttccaatgggcgatcgcca
gcgccaatgcccccgaaacaggaaccaaagatgatgtccattagccagaagcaacgctcc
cagaaaagacgggaacgacaggccgcccgcaccgaagtggcccaacaaaaatgggacatt
ggcgatcgcgtccaccacaacgtctttggggaaggggaagtgattaaaatttttggggat
gacaaaaagaccaacctggcgatccagtttcccaatctcggtaaaaaaatcattgatccc
cgggtggccccgatgaaaaagctttaa
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integrated database retrieval system
