Picosynechococcus sp. PCC 7002: SYNPCC7002_A0980
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Entry
SYNPCC7002_A0980 CDS
T00664
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03410
Base excision repair
syp03430
Mismatch repair
syp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYNPCC7002_A0980 (recJ)
03430 Mismatch repair
SYNPCC7002_A0980 (recJ)
03440 Homologous recombination
SYNPCC7002_A0980 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A0980 (recJ)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SYNPCC7002_A0980 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYNPCC7002_A0980 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SYNPCC7002_A0980 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
CYTH
Motif
Other DBs
NCBI-ProteinID:
ACA98983
UniProt:
B1XJC3
LinkDB
All DBs
Position
1008671..1010671
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AA seq
666 aa
AA seq
DB search
MNFRLPQQRWHIADRQPDITQSLVEAMGLNPLVAQVLVNRNIRTPEQAKIYIQPESQRLP
APLVEFEDLALSVELLQEAIAEETLIAICGDYDADGMTSTALLLRALGHVGTKVTYAIPS
RMKDGYGINERIVTELAEEGVGLILTVDNGISAYEPINLARDLGLDVIITDHHDLPDQLP
PANAILNPKLLPTMSPYAGLAGVGVAYVLAVSLAQAVDKLEGLTSQILELFTLGTIADLA
PLTGVNRRWLKRGLKLLPQSELAGVQALMQIAGVDDQKKQLKPDDIGFRLGPRINAVGRI
DDPQKVIELLTTDEPGLALERAMQCEQINKQRQEMCTQIEAEAIALVEETPIDYQGQRVL
VVCKEEWHHGVIGIVASRLVERYGVPVFICTAEEDGKIRGSARGIEEFNVFEALNYCQDL
LGKFGGHKAAGGFSLARDNLAAFTEKLSEFAHQLLKPEHLKPLVKIDGAVNFTDLTPEFY
QQIDQLHPWGIGNPEPIFWTKNVQILEQRTIGKNHLKFSLGQTIAGQTFTIKAIAWQWGD
YLPLPPTLDIAYKLKENRWNGEVNLELELVGARPSEAPRPAVPDQEMSPQAQPQHSEKTF
LFNDRTYFCTLADQGLTLRIRNDQGKLLAIKKGQRQGKLGEQTVDVTQPPFFQMIKTAIA
TLEQAN
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcgcctcccccaacagcgctggcacattgccgatcgccaaccggatatcacc
caatcattggttgaggcgatgggccttaatccgcttgtggcccaggttttagtgaatcgc
aatattcgcacgccagagcaggcgaagatctacatccagccggaatcccagcgattacct
gcgcccttggtggaatttgaggatctggccctcagtgtggaacttctccaggaggcgatc
gccgaagaaactctcattgccatttgtggcgattatgatgccgatgggatgaccagtacc
gcgttgttgttgcgggccttgggccatgtgggaaccaaggtaacctacgcgatccccagt
cgcatgaaagatggctacgggatcaatgagcgcatcgtcaccgagctcgccgaggaaggg
gtgggcttaattctcacggtagacaacggcatttccgcctacgagccgatcaatttggcg
cgggatctgggcctggatgtgatcatcactgaccaccatgacttgccggatcaattgccg
cccgccaatgcgattctgaatccaaagttattgccgaccatgtctccttatgctggttta
gccggggttggggtagcttatgtgctggcggtgtccctcgcccaggcggtagacaagcta
gaagggctcaccagccaaattttagaattatttaccctggggaccatcgctgatctggcg
cccttgaccggggtgaatcgtcgctggttgaagcgtggcctcaagcttttaccccagtcg
gagttggcaggggtgcaggccctcatgcaaattgctggggtcgatgaccaaaagaaacaa
ctcaagcccgatgatattggctttcgccttggcccccgcattaacgccgttggtcgcatt
gatgatccccaaaaagtaattgaattgctaactaccgacgaaccgggtttggccctagag
cgggcgatgcaatgtgagcagatcaataagcagcgccaggaaatgtgcacccagatcgaa
gcggaggcgatcgccctagtagaagaaacccccatcgattaccaaggacagcgggtgttg
gtggtttgcaaagaagaatggcaccatggcgtaattggcattgtcgcttcccggttggtc
gaacgctatggtgtgcccgtctttatctgtactgctgaggaagatggcaaaattcgcggt
tcagcccggggcatcgaagaatttaatgtgtttgaggcgctgaactattgccaagatctc
ctgggtaaatttgggggccacaaagccgctgggggattttcccttgccagagataaccta
gctgcgtttaccgaaaaacttagtgaatttgcccaccaattgctcaaaccagaacaccta
aaacccttggtgaaaattgacggggcggtaaatttcacggatttaaccccagagttttac
caacagattgatcaactccatccctggggcatcggcaatccagaaccgattttctggaca
aagaatgtacaaattctagaacaacgtaccattggcaaaaatcacctaaaattcagcctc
ggccaaaccatcgccggtcaaacatttaccattaaggcgatcgcctggcaatggggagac
tatctgccacttcccccaaccctggacattgcctacaaactcaaagaaaatcgctggaat
ggtgaggtgaacctagagctagaattggtcggggcgcgtcccagtgaagccccgcgtcct
gcggttccagaccaggaaatgtctccccaagctcaaccccagcactcagaaaagactttt
ctgtttaatgaccggacgtatttctgtaccctcgcggatcagggattgaccctcagaatt
cgcaatgatcaaggtaagttattggcgattaaaaaaggtcaacggcagggcaaactcggc
gagcaaaccgttgatgttacccaacctcctttttttcagatgatcaaaacggcgatcgcc
accctcgaacaagccaactaa
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