Picosynechococcus sp. PCC 7002: SYNPCC7002_A1066
Help
Entry
SYNPCC7002_A1066 CDS
T00664
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNPCC7002_A1066 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syp03019
]
SYNPCC7002_A1066 (pnpA)
03016 Transfer RNA biogenesis [BR:
syp03016
]
SYNPCC7002_A1066 (pnpA)
Enzymes [BR:
syp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SYNPCC7002_A1066 (pnpA)
Messenger RNA biogenesis [BR:
syp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SYNPCC7002_A1066 (pnpA)
Transfer RNA biogenesis [BR:
syp03016
]
Prokaryotic type
tRNA degradation factors
SYNPCC7002_A1066 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
ACA99068
CyanoBase:
SYNPCC7002_A1066
UniProt:
B1XJU0
LinkDB
All DBs
Position
1090538..1092682
Genome browser
AA seq
714 aa
AA seq
DB search
MQEHIQSISFDGREIRLKTGLFAPQAGGSVLIESGDTAVLVSATTAPGRQGIDFLPLLVD
YEERLYAAGRIPGGYLRREGRPPERATLISRLIDRPMRPLFPQWLRDDIQIVATTLSLDE
EVPPDVLAVTGASVATLLAGLPFYGPMAAVRVGLVGDDFILNPTYREMMNGDLDLVVAGT
PDGVIMVEAGANQLPEADMIEAIDFAYEAIQELIEAQRALMKELGVEMVSAEPPAKDEEL
EKFIGDRTTDKIKKVLSQFDLDKNGRDAALDEIKATEIIEAIEALPEDAPLRLKTTEEPK
LIDNTFKALTKKLMRSQIVEDGVRVDGRKLDQVRPISCRTAVLPRAVHGSGLFNRGLTQV
LSIATLGTPGDAQEMDDLHPSDEKRYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERA
LLPVLPPKDEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIAKPVSGAAMGLIK
EGKEVRILTDIQGIEDFLGDMDFKVAGTADGITALQMDMKITGLAVEVVAEAIKQALPAR
LHILEKMTDVIAEPKELSPAAPRLLTIKIDPDLIGMVIGPGGKTIKGITEQTRAKVDIAD
DGTVTIASSESENAEKAKRLIVNMTRKLNEGDVYFGKVTRIIQIGAFVEIMPGKEGMIHI
SQLAEGRVGKVEDEVAVGDEVVVKVREIDNKGRINLTRLGIHPDEAAAARVAAQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacatattcagtcgatttctttcgatgggcgagaaattcgactaaaaacaggt
ttgtttgcgcctcaggccggcgggtcagttttaattgaatcaggagatacagcggtttta
gtcagtgcaacgacagcccctggcagacaaggaattgactttctacctttgttggtagat
tacgaagaacggttatacgcagcaggacgaattcccggtggttatttaagaagagaaggc
cgccccccagaacgggcaacgctcatttcgcgcctcattgaccgaccgatgcgcccgcta
tttccccagtggttgcgggacgatattcagattgtcgctacaacgctctccctcgatgaa
gaggtaccgccggatgtcctcgctgtgacgggggcttctgtggccacattgctcgcgggt
ttacctttctacgggccgatggctgccgtccgggttggtctggtgggggatgattttatc
ctcaatcccacgtaccgagaaatgatgaatggggatttagacctcgtagttgctggcacc
cccgacggtgtgatcatggttgaggccggagccaatcagttgccagaagcggacatgatc
gaggcgattgatttcgcctacgaggcgatccaagagttgatcgaagcccaacgcgcgctg
atgaaggaacttggcgttgaaatggtcagcgctgagccacctgctaaggatgaggaactc
gaaaaattcattggcgatcgcaccacggacaagatcaaaaaagtcttgagtcaatttgat
ctcgataaaaatggtcgcgatgccgccctcgatgaaatcaaagcaacagaaatcattgag
gccatcgaagctctgccggaagatgcaccactgcggctgaaaaccacagaagagccgaag
ctcattgataataccttcaaggcgctgacgaaaaagctgatgcggagccaaatcgtcgaa
gatggggttcgggttgatggtcgtaaattggatcaagtgcgccccatttcctgccgcact
gctgtgttaccgagagccgtccatggtagcggtttatttaaccgaggtctgacccaagtt
ttatccattgctaccctcggaacgcctggtgatgcccaagagatggacgatttacatccc
tccgacgaaaagcgctacttgcaccattacaatttccccccctactccgtgggtgaaact
cgcccaatgcgatcgcctggccgccgggagattggccacggtgccttggccgaacgcgcc
cttttacccgtattgccgccgaaggatgaatttccttatgtcattcgggtcgtttctgaa
gtcttatcttccaacggatccacctccatgggttctgtttgtggctctaccctcgcattg
atggatgctggggtgcccattgccaagcccgtgagtggtgccgcgatggggctgatcaaa
gaaggcaaagaagtccgcatcctcaccgatatccaggggattgaagacttcctcggcgac
atggactttaaggttgccgggacagctgacggaattaccgccctccagatggacatgaag
atcactggcctagccgttgaagtggtcgcagaagcgattaagcaagctttacccgctcgt
ctccatatcctcgaaaagatgaccgatgtcattgctgagccgaaggagttgtccccggct
gctccccgtctactcaccattaagattgatcctgatttaattgggatggtcattggcccc
ggtggtaaaaccattaaggggattaccgaacaaacccgtgccaaggtggatattgccgat
gacggtaccgtaacgatcgcctcctctgaatcggaaaatgccgaaaaagccaagcggctg
atcgtaaacatgacccgcaagctcaatgaaggggatgtatatttcggtaaagtcacccgt
attattcagatcggtgcctttgtggaaattatgccgggtaaagaagggatgattcacatt
tcgcaactggcagaaggccgcgtgggcaaagtcgaagatgaagttgctgtcggtgatgaa
gtggtggttaaagtgcgcgaaattgataacaaaggacgcattaatctcacccgcctaggg
atccatcctgatgaagcagccgctgctcgggttgctgctcaataa
DBGET
integrated database retrieval system