Picosynechococcus sp. PCC 7002: SYNPCC7002_A1293
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Entry
SYNPCC7002_A1293 CDS
T00664
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYNPCC7002_A1293 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A1293 (xth)
Enzymes [BR:
syp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SYNPCC7002_A1293 (xth)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SYNPCC7002_A1293 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ACA99290
UniProt:
B1XL35
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All DBs
Position
1344169..1344843
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AA seq
224 aa
AA seq
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MVDPDFPRQPFEALGYHTSISGQKSYNGVALLSREPLQDVIIGFTPVVGAAIAQDFDAQK
RVISGVIGDVRVVNLYVPNGSAVGSEKYDYKLGWFEVLKAYLKELCKDDREILMCGDFNI
ALEDRDIYMPKKPDHIMASPAERETLTAILDFGFQDVFRKFNQEADQFSWWDYRTRGFSR
NRGWRIDHIYLTEKLYGQAKRCWIDREPRGWEKPSDHTPVIVEL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggtagatccggactttccccggcagccctttgaagccctggggtatcacacctcgatc
tctggccaaaaatcctacaatggcgttgctctcctcagtcgggaaccgctccaggacgtg
attattggttttacgcctgtggtcggggcggcgatcgcccaggattttgacgcgcagaaa
cgggtgatttctggggtgattggcgatgtgcgggtggtgaatctctatgtgcccaatggt
tccgccgtcggtagcgaaaaatatgactacaagctgggctggtttgaggttctcaaggcc
tatttaaaagaattgtgcaaagacgatcgagagattttaatgtgcggcgattttaatatt
gccctcgaagaccgggatatttatatgccgaaaaaaccggatcacattatggcttccccc
gcagaaagagagactttaacggcgatcctggacttcggctttcaggatgtattccgcaaa
tttaaccaagaggcagatcaatttagctggtgggattatcggacgcggggttttagtcgg
aatcgcggctggcgcattgaccacatttatctgacggaaaagctttacggccaggcaaaa
cgctgttggatcgaccgggagccgcgcggttgggaaaaacccagtgaccatacccctgta
attgtggagctttag
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