Picosynechococcus sp. PCC 7002: SYNPCC7002_A1900
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Entry
SYNPCC7002_A1900 CDS
T00664
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNPCC7002_A1900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syp03019
]
SYNPCC7002_A1900 (recQ)
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A1900 (recQ)
Enzymes [BR:
syp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNPCC7002_A1900 (recQ)
Messenger RNA biogenesis [BR:
syp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SYNPCC7002_A1900 (recQ)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SYNPCC7002_A1900 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
RecQ_Zn_bind
HRDC
HTH_24
ResIII
Helicase_Sgs1
MarR
GerE
HTH_IclR
HTH_5
MarR_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACA99887
LinkDB
All DBs
Position
complement(1984715..1986853)
Genome browser
AA seq
712 aa
AA seq
DB search
MSQFPSLEAALKHFFGYDNFRHGQKAVITAALENRDILALMPTGAGKSLCFQLPALLKPG
LTVVISPLIALMQDQVDALTDNGIGATFLNSTLNLDQARSRIQAIFNGNIKLLYVAPERL
FNEGFQQLLTDVDQTIGLTGFVVDEAHCVSEWGHDFRPEYRQLSRIRRRYPRTPCQAFTA
TATQRVREDIIDQLALQNPSFHCTSFNRPNLYYEVLPKVRKSYTQLLCYVRQRRGQPGII
YCSSRKKVDELADRLKQDGVKALPYHAGLADRLRADYQEQFIRDDVPVMVATVAFGMGIN
KPDVRFVVHYDLPTNLERYYQESGRAGRDGEPAHCTLFYRAGDIKRAEYFIELKEDEQEK
RIAYQQLQKMIDYAEGIDCRRTIQLSYFGEQFPGDCGGCDNCQNPRPIEDWTIEAQKFLS
CVARCRERYGMTYIIDVLRGSKKEKIIQNGHHQLSTYGIGLDHTKEAWKNLGRSLLYQGL
MTETSDGYRVLKLNARSWEILRQQKTVKIAVERRQTAQEILGISESRLDAEILFGQLRQL
RKQLADANWVAPYMIFSDATLRQMATRRPRTQADFCLISGVTSAKYQRYGEPFLAAIQEF
CASQEPPKPQVNGTQLLTLQLYQQGLSVTEIAKRRSLTAGTINEHLATLLQNGEITDLDR
LVKPAAQVEIEKAIATVGAESLTQLREHLQEKYSYDAIKLVRAKLLQTAKSA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcccatccctagaagccgccctcaaacacttctttggatatgacaatttt
cgccatggccaaaaggcggtcattaccgctgccctggaaaatcgcgacatcctcgccctg
atgccaacaggagcgggcaagtccctttgtttccaactgcccgccctgctgaaaccgggg
ttgacggtggtgatttctcccttgattgccctaatgcaggatcaagtcgatgccctgacg
gacaatggcattggtgcaactttcctaaacagtaccctcaacctcgaccaagcgcgatcg
cggattcaggcaatttttaacggcaacattaaactgctctatgttgccccagaacggctg
tttaacgagggcttccagcaactgctcacagatgtggatcagaccattggcctgactgga
tttgtggtggatgaagcccactgtgtttcagagtggggccatgattttcgcccagaatat
cgtcaactgagtcgcatccggagacgctacccccggactccttgccaggcctttactgct
accgccacccagcgcgtccgggaagatattattgatcaacttgccctacagaaccccagc
tttcactgcaccagctttaatcgccccaacctttactacgaggttcttcccaaagtccgg
aaaagttatacgcaactgctgtgctatgtccgtcaacggcgtgggcagccaggaattatc
tactgttctagccgcaaaaaagtagacgagttggccgatcgcctcaaacaagatggcgtt
aaagccttgccctaccatgcaggcttggcggatcgtttacgagcggattatcaagagcaa
tttatccgggatgatgtgcctgtgatggtcgccaccgttgcctttggcatgggcatcaac
aaacccgacgtgcgctttgtggtgcattacgatttaccgaccaatttagaacgctattac
caagagtcgggtcgtgcgggtcgggacggagagcctgcccactgtactctgttctatcgg
gcaggggatattaaaagggccgaatatttcattgaactcaaggaagacgaacaggaaaaa
cgcatcgcctaccagcaactgcaaaagatgatcgactatgccgaggggatcgattgtcgg
cggacgatccaactgagctattttggggagcaatttccgggggactgtggcggttgcgat
aattgtcagaatcctcgccctatcgaagattggacgattgaggcccagaagtttttatcc
tgtgttgcccgttgtcgagaacgctatggcatgacctacattatcgatgtgttgcggggt
tctaagaaagaaaaaattattcaaaacgggcaccaccaactgtctacctatggcattggc
ctcgaccatactaaagaagcatggaaaaatttggggcgatcgctcctgtatcagggcttg
atgaccgaaacaagcgatggctatcgagtcttgaaactcaacgctcgcagttgggaaatt
ttgcgacaacagaaaacagtgaaaattgctgtggaacggcggcaaacggcccaggaaatt
ctagggatttctgaaagtcgcctcgatgcggaaattctttttgggcaactgcgacaactg
cggaaacaattggccgatgcaaattgggttgctccctatatgattttttccgatgcgacc
ctccggcaaatggcaactcggcgaccccgcacccaagcagatttttgtttgatttctggg
gtaacgagtgcaaaatatcaacgttatggggagcctttcctcgcggcgattcaggaattt
tgcgccagccaagagccaccaaaaccccaggtcaatggcacccagttactcaccctccag
ctttatcaacagggcctttcggttacagaaattgccaagcggcgcagtctgacggcgggg
acgatcaacgagcacctggcaacattactccagaatggcgagattactgacctagaccgc
ctcgtaaaaccagccgcccaagtggaaattgaaaaggcgatcgccaccgtgggagcagaa
tctttaacgcagttgcgggagcacctccaggaaaaatacagctacgatgcgattaaactg
gtgcgggctaaactgctgcaaactgcaaaatcagcctag
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