Picosynechococcus sp. PCC 7002: SYNPCC7002_A2043
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Entry
SYNPCC7002_A2043 CDS
T00664
Symbol
rpoC2
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SYNPCC7002_A2043 (rpoC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syp03021
]
SYNPCC7002_A2043 (rpoC2)
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A2043 (rpoC2)
Enzymes [BR:
syp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SYNPCC7002_A2043 (rpoC2)
Transcription machinery [BR:
syp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SYNPCC7002_A2043 (rpoC2)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SYNPCC7002_A2043 (rpoC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RPOC_hybrid
Apocytochr_F_C
RPN1_C
Motif
Other DBs
NCBI-ProteinID:
ACB00030
UniProt:
B1XHW1
LinkDB
All DBs
Position
complement(2124345..2128340)
Genome browser
AA seq
1331 aa
AA seq
DB search
MTKEKPAVFYNRIIDKGRLKKLMSWAYTSFGSAHCATMADELKTLGFRYATQAGVSISVD
DLQVPPIKRQMLDSAEQEIKTTEARYSRGEITEVERFQKVIDTWNSTSESLKDEVVKNFR
ETNPLNSVYMMAFSGARGNLSQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYII
SSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVREEDCGTARGLKLRAMTDGEREQIS
LEDRLFGRVLNADVVDPKTGEVIAQRNQDIDADLAKKIATTVAEVEVRSPLTCEAARSVC
RKCYGWSLAHGHMVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTKEAARTIKASKAG
TIQFKDGLSTRRMRTPHGDEVEQVEVAGTLVLKPSDNGKMVSHALSPGSFVLVAEGASVK
KGDLLVEVGAGQKTQKSTERATKDVSSDLAGEVLFDNLIAEEKTDRQGNTTRSAQRSGLM
WVLAGDVYNLPAGAEPVVENGTHVNVGDILAETKLVSLSGGVVRLIPNSREIEIVTASVL
LDEAKVLHETGGGSEQYIIETSKGDQFLLKTAPGTKVQNNANIAELIDDRYRTTTGGIIK
YSGVEVAKGTKKQGYEVLKGGTLLWIPEETHEVNKDSSLRIVEDGQYVEAGTEVVKDIFS
QSAGVAEVIEKNDILREVIIKPGELHLTEEAIADKYHEQLIQPGEEVIPGVTIDKLSYGE
KVISTEGVALLVRPVEEFQVEDTPVEPSQGSINEQGAGRNIELHAVQRLFFKDGERVKSV
DGVSLLSTQLIIEIGAIEGEDEDVLANLYADIELQDDPTDDEVKRLQLVILESLILRRDS
DSDPFGGQVQTRLMVEDGQEIVPGAVVARTEIQCKEPGEVRGIRSGQEAIRRLLIVRDSD
RQTLAIDGKAKVKENTLVVAGTEIAEGVVIEDSAQVLKVSDKEIVLRHARPYRVSGGAVL
HIDEGDLVQRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEAAVLARRPGTCQVEY
LDDETVDVKVIEDDGVISEYPVSLNQSVMVVDGQRVGPAEPLTDGLNNPHEILEIFFDYY
AESKGIYEAALIGLRESQRFLVEEVQRVYQSQGIDISDKHIEVIVRQMTAKVRIDDGGDT
TMLPGELIELRQVEQVNEAMSITGGAPARYTPVLLGITKASLNTDSFISAASFQETTRVL
TEAAIEGKSDWLRGLKENVIIGRLIPAGTGFASQNDFVDEGTSRSPNGYSNVVTNDNGAG
LSSRTYDDLDGSEILDDQTARAFTEGKSNRKDIISGDELISDDTPIPSDVQGKAPVIDDD
AMIDDNWMKDQ
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggaaaaacccgccgttttttacaaccgcatcatcgataaaggacgtctgaaa
aagctgatgtcctgggcctacacgagttttggttctgcccactgcgccaccatggccgac
gaactgaagacccttggttttcgttacgcaacccaggctggtgtctcgattagtgtcgat
gacctccaggtaccgcccatcaagcggcaaatgctagacagtgccgaacaggaaattaag
accacagaagctcgctattcccgtggtgaaattactgaggttgagcgtttccaaaaggtt
attgacacctggaacagcacctctgaatcccttaaagatgaagtggtcaaaaacttccgg
gaaaccaaccccctcaactccgtttacatgatggcctttagtggtgcccggggtaatctc
tcccaagtgcgtcagttggtcgggatgcgcggcttgatggcagatccccaaggggaaatt
attgacttgccgattaaaaccaacttccgggaaggtctcacagtcacggaatacattatt
tcttcctatggtgcccgtaaaggtctggtagataccgccctccgcacggcagattctggt
tatttgacccgacgtttggtggatgtttcccaggatgtgatcgttcgagaagaagactgc
ggcaccgcccggggtctcaaactccgcgccatgaccgatggtgagcgtgaacagatttcc
cttgaagatcgcctctttggtcgggtactcaatgccgatgtggttgatcccaaaaccggc
gaagtcattgcccaacgaaatcaagatattgatgctgatctggcgaagaaaattgcgact
acggtagctgaggtggaagtgcgatcgccgctgacctgtgaagcggcccgttccgtctgt
cgcaagtgctatggttggagccttgcccatggtcacatggtcgatatgggagaggccgtc
gggattattgcggcccaatccattggggagcctggcacccagttaaccatgcggactttc
cacaccgggggggtatttaccaaggaagccgcccggacgatcaaagcctccaaagctggc
acaattcagtttaaagatggcctcagcacgcggcggatgcggacgccccacggggatgaa
gtagagcaggtagaagtagccggtactctggtgttgaagcccagcgacaatggcaaaatg
gtaagccatgctctctcaccgggttcctttgtcttggtggcagaaggagcttccgtcaag
aaaggcgatttgctcgttgaagttggtgcgggtcagaaaacccaaaaatccaccgagaga
gcgaccaaagacgtttcctccgatctggctggggaagttctctttgataatctcattgcc
gaagaaaaaacggaccgtcaaggcaacacaacccgctccgcccaaagaagtggtttgatg
tgggttttagctggggatgtttataatctgccggctggggctgaacccgtcgttgaaaac
ggcacccatgtcaatgtaggggatatccttgctgaaacaaaattagtttccctctccggt
ggtgttgtacgactcattcccaatagtcgagagattgaaattgtcaccgcttcggtactt
ctagatgaggcgaaggtactccacgaaactgggggcggctcagaacaatacatcattgaa
acctctaaaggggaccagttccttctaaaaacagcccctggcacgaaggtgcaaaacaac
gccaacatcgccgaactcatcgatgaccgctaccggacgaccaccggaggcatcatcaaa
tactctggtgtagaagtggccaagggcacgaaaaaacagggctacgaagtgctgaaaggg
ggcacactcctttggatcccagaggaaacccacgaggtaaacaaggatagctccctccgt
atcgtcgaagatggccagtacgtcgaagcgggcacagaagtcgttaaggatattttctcc
caatcggctggggttgcagaagtcatcgaaaagaatgacattctccgggaagtgattatt
aagccgggtgaattgcacctcaccgaagaggcgatcgccgataaatatcacgaacaactg
atccagcccggtgaagaggtgatccctggggtgaccatcgacaaactgagctacggcgaa
aaagtgatcagcaccgaaggggtcgcgctccttgtccgtcccgtcgaggaattccaagtc
gaggatactcccgttgaaccgtcccagggttccattaacgaacagggcgcaggccggaat
atcgaactccatgctgtccagcgcttatttttcaaagatggcgaacgggtgaaatccgtt
gatggtgtttctctcctgagcacccagctgattatcgaaattggtgccattgaaggggaa
gatgaagatgtcctggcgaacctctatgcggacattgaactgcaagatgatcccaccgat
gacgaagtaaaacgtctccagttagtgattcttgagtccttgattctccgccgtgattcc
gacagtgatccctttggcggccaagtccagacccgactcatggtcgaagatggtcaggaa
attgtccctggcgcagtggtggcccgcacggaaattcaatgtaaagaacccggtgaagtt
cgagggatccgttccggtcaagaagcgatccgccgtttgttgattgtgcgtgatagcgat
cgccaaaccctcgccatcgacggcaaagccaaggtgaaagaaaataccctggtggttgct
ggcaccgaaattgccgaaggcgttgtgatcgaagattccgcccaagtccttaaggtcagc
gacaaagaaattgtcctccgtcatgcccggccctaccgtgtgtctggtggtgcagtcctg
cacatcgacgaaggtgatcttgtccaacggggtgataatctcgtgctgctcgtctttgag
cgggcaaaaactggggacatcatccagggtctcccccggatcgaagaactcctcgaagcc
cggaaacccaaggaagcagcagtgctcgcccgtcgccctggcacctgccaagtcgaatac
ctcgacgacgaaaccgtggatgtcaaagtcatcgaagatgatggtgtcattagcgagtat
ccggttagcctcaaccaaagtgtgatggtagttgatggtcaacgggttggcccagcagaa
cccctcactgacggcttgaataatccccacgaaatcctagaaattttctttgattactac
gctgagagtaaggggatatacgaagcagctttgattggtctccgggaatctcaacggttc
ttggtagaagaagtgcagcgggtttaccagtcccagggcattgacatttctgacaaacac
atcgaggtgatcgtgcgtcagatgacggcaaaagtccgcatcgatgacggtggcgatacc
acaatgttgccaggagaattaattgagctacgtcaagtagaacaagttaacgaagccatg
tccattactggtggtgcaccggcccgttacactccagtgctcctagggattaccaaagct
tccttgaacaccgatagctttatttctgcggcttccttccaagaaaccacacgggtactc
accgaagcggccattgaagggaaatccgactggttacggggtcttaaggaaaacgtgatt
atcggtcgcttgattccggccggaacggggtttgcgagtcaaaacgatttcgtagacgaa
ggcacttcacggtctcccaatggctacagtaatgttgtgaccaatgacaatggtgctggg
ttatcgagtcgtacctatgatgatctcgatggcagtgaaattcttgatgatcaaacagcg
cgggcctttacggaaggaaaatcaaaccgtaaggatattatttctggcgatgaattgatt
tctgatgatacgccgatcccgtcggatgttcagggaaaagcacctgtgattgatgatgat
gcgatgattgatgataattggatgaaagaccaataa
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