Picosynechococcus sp. PCC 7002: SYNPCC7002_A2045
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Entry
SYNPCC7002_A2045 CDS
T00664
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SYNPCC7002_A2045 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syp03021
]
SYNPCC7002_A2045 (rpoB)
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A2045 (rpoB)
Enzymes [BR:
syp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SYNPCC7002_A2045 (rpoB)
Transcription machinery [BR:
syp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SYNPCC7002_A2045 (rpoB)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SYNPCC7002_A2045 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ACB00032
UniProt:
B1XHW3
LinkDB
All DBs
Position
complement(2130457..2133768)
Genome browser
AA seq
1103 aa
AA seq
DB search
MTHITQSLLPDLIDIQRSSFRWFLEKGLIEELNSFSPITDYTGKLELHFIGEKYRLKEPK
YSMSEAKSRDSTYGVQMYVPTRLINKETGEIKEQEVFIGDLPLMTDRGTFIINGAERVIV
NQIVRSPGVYYKSEVDKHGRRTYSASLIPNRGAWLKFETDKNNIVWVRIDKTRKLSAQVL
LKAMGLSDSEILDALRHADFYQKTLEKEGNPSEEEALLELYRKLRPGEPPTVSGGQQLLE
SRFFDNKRYDLGKVGRYKINKKLRLNIPDTVRVLTPTDILSAIDYLINLEFDTGNIDDID
HLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSEADTLTPASLVNPKPLVAAIKEFF
GSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPTQYGRICPVETPEG
PNAGLIGSLATYARVNEYGFIETPYYKVENGKILFDQGSVYLTAGEEDDLRVAPGDVPRD
EDGNILGETVPVRYRREFSTTTPEQVDYVAVSPLQIVSVATSLIPFLEHDDANRALMGSN
MQRQAVPLLRPERPLVGTGLEAQAARDSGMVIVSRCDGVVTFVDATVIRVQPTGEGTEDA
AEIVYPLQKYQRSNQDTCLNQRPLVDIGEDVVAGQVLADGSATEGGEIALGQNVTIAYMP
WEGYNYEDAILISERLVYDDVYTSIHIEKFEIEARQTKLGPEEITREIPNVGEDALRHLD
EQGIIRIGAWVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKG
RVVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPIEDMP
YLPDGSPVDIVLNPLGVPSRMNVGQVFECLLGWAGEHLNARFKMMPFDEMHGAEASRETV
HGKIREAAKKPNKDWVFNEDEPGKIQVYDGRTGESFDRAVTVGKAYMLKLVHLVDDKIHA
RSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNEAL
NAIVKGKPIPRPGTPESFKVLMRELQSLGLDIAVHKVEAADDGTSRDVEVDLMMDNQRRA
PNRPTYESVTNEDQEDLVEEAAE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgactcatatcacccaaagcctgcttcctgatctaattgatattcaacggtcaagcttt
cgttggttccttgaaaaagggttaattgaggagctcaacagtttctcgcccatcaccgac
tataccggcaaattagagctgcacttcattggggaaaaataccgtctcaaagaacccaag
tacagcatgagtgaggccaagagtcgggatagcacctatggtgtccagatgtatgtgccc
acccgcctcatcaacaaagaaactggcgaaatcaaagaacaggaagtcttcattggggat
ctgcctctgatgacagaccgtggtaccttcatcatcaatggtgcagaacgggtaatcgtc
aaccaaattgtgcgatcgcctggggtttattacaaatccgaagtcgataaacatggtcgt
cgcacctactccgcatccctcattcctaaccgtggggcatggttgaaattcgagacagac
aaaaacaacattgtctgggtgcggattgataaaacccgtaagctttcagcccaggtactc
ctcaaggctatgggtctatccgacagcgaaatccttgacgccttgcgccatgctgacttc
taccaaaaaaccctcgaaaaagaaggcaatcccagcgaagaagaagcactcctcgaactc
tatcgcaagctccgccccggtgaacctcccacggtcagcggtggtcagcagttattagaa
tcccgtttcttcgacaacaagcgctacgacttgggtaaagtcggtcgttacaaaatcaat
aaaaagttacggctcaacatccccgataccgtacgggtactcacccccaccgatatcctc
tcggcgattgattatctcattaacctagaattcgataccggaaacattgacgacatcgat
cacctgggcaaccgtcgtgttcggtctgtgggtgaactcctacaaaaccaagtacgtgtt
ggtctaaaccgtcttgaacgcatcattcgtgaacgcatgaccgttagcgaagccgacacc
ctaacaccagcctccttggttaacccaaaaccccttgttgcggcgattaaggaatttttc
ggctcctcccagctttctcagtttatggatcaaaccaatccactcgctgagttgacccac
aaacggcgtctatccgccctcggccctggtggtttaacccgtgaacgggcaggctttgct
gtgcgagacattcaccccacccagtatggtcggatttgtcctgtagaaaccccagaaggt
cccaacgctggtctcatcggttccctagcaacctatgcccgtgttaatgaatatggcttt
atcgaaacgccctattacaaagtcgaaaatggcaaaatcctttttgaccaaggctctgtt
tacctcacggcaggcgaagaagacgatctgcgggttgcccccggcgatgtaccacgggat
gaagacggtaacattctcggtgaaacagttcccgtgcgttatcgtcgggaattctcgacc
accactcccgaacaggtggactatgtggcagtttcgcccctacaaattgtttctgtggca
acctcactgattcccttcctagagcacgatgacgcgaaccgcgctctgatgggttctaac
atgcagcgacaagctgttcccctcctcagaccagaacgtccccttgttggcaccggtctg
gaggcacaagcagcccgtgactctgggatggtcattgtgtcccggtgtgatggtgttgtt
accttcgttgacgctaccgtaatccgcgtgcaaccaaccggtgaaggcaccgaggacgcc
gctgaaattgtttatcctctgcaaaaatatcagcgttctaaccaagatacttgtcttaat
cagcgtccccttgtagacattggtgaagatgttgtcgctggtcaggttctcgcagatggc
tccgcaactgaaggtggtgaaattgccctcggtcaaaatgtgaccatcgcctacatgccc
tgggaaggctacaactacgaagacgcaatcctcatcagtgagcgccttgtctatgacgat
gtgtataccagtatccacattgaaaaattcgaaattgaagcccgtcaaacaaagttgggg
cctgaagagattacccgtgaaattcccaacgttggggaagatgccctgcgtcacctcgat
gaacaagggattattcgcattggtgcttgggtagaatctggtgacattttggtgggtaaa
gtcactccgaaaggtgagtccgatcagccaccggaagagaaactcctacgggcaattttc
ggggagaaggcacgggatgtacgggataactccctccgggttcccaacggtgaaaaggga
cgtgtggttgatgtccgcgtctttacccgtgagcagggtgatgaattacccccgggtgcc
aatatggtggttcgggtctacgtggctcaaaaacgaaaaatccaagttggggataaaatg
gcaggccgccacgggaataaggggattatttcccggattctcccgattgaggatatgcct
tacttacccgatggttcccctgtcgacattgtgctcaatcccctaggggttccctcccgg
atgaacgtaggccaagtttttgagtgtctcctaggctgggccggtgaacatctcaatgct
cgctttaagatgatgcctttcgacgaaatgcacggagctgaagcatcacgggaaaccgta
catggcaaaattcgcgaagcagcgaaaaagccaaacaaagactgggtctttaatgaagat
gaacctggcaaaatccaagtctacgatggtcggactggggaatcctttgatcgagccgtg
actgtcggtaaagcgtacatgcttaagcttgttcacttggttgacgataagatccacgcg
cgttctacggggccatactctctggtgacgcagcagccccttggtggtaaagcccaacag
ggtggtcagcgcttcggggaaatggaggtttgggctctcgaagcctatggagccgcctat
actctccaagagttactcacggtgaaatccgatgatatgcaaggacgtaacgaagcctta
aatgcgattgtcaaagggaagccgattcctcgcccaggtactcccgaatctttcaaagtt
ctaatgcgagaattgcaatccctgggtctcgacattgctgttcataaagtggaagcagcc
gatgatggtaccagtcgtgatgtggaagtagatttgatgatggacaaccaacgtcgcgcc
cctaaccggcccacctatgagtcagtcaccaatgaagatcaagaggatttagtagaagag
gcagcagagtaa
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integrated database retrieval system
