Picosynechococcus sp. PCC 7002: SYNPCC7002_A2103
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Entry
SYNPCC7002_A2103 CDS
T00664
Name
(GenBank) UvrD/REP helicase domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03420
Nucleotide excision repair
syp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SYNPCC7002_A2103
03430 Mismatch repair
SYNPCC7002_A2103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A2103
Enzymes [BR:
syp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNPCC7002_A2103
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYNPCC7002_A2103
MMR (mismatch excision repair)
Other MMR factors
SYNPCC7002_A2103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACB00087
UniProt:
B1XIA2
LinkDB
All DBs
Position
complement(2179439..2181688)
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AA seq
749 aa
AA seq
DB search
MNHLSVHQQQFLTQLAAGLRPGQDALAQWRSGEMAIAAVPGSGKSHALAVAAVLTLARQS
LHHGQQLVIVTFTRAAAEGIKQKILTHLKAAQLPVVGFSVQTIHGLALQIASRHPEVSGV
DLDSLSLQDIPANHPILRAAVEQWIQAHGEQYERLCQGARSDQEKTEQLRRRFALSTEIL
PDLAHTVIHESKSSNLSPQAVAKLGETLDDPYQSLAIAAGIYQNYQQLLQENNVLDYDDL
VLGAIRVLQQPELQQYWQGQIYGIFEDEAQDSSPLQEQLIRLLATAPESGECNLVRVGDP
NQAINSTFTPADPFYFNRFCQAVDCAEIHYAGRSSLPIITAANQMLHWASHTLSPPDRFA
FRWQEIFPVPNHDPQQNANPDPTGAGVERHYPQDIYATVQQLGDRLETLLTENPDHSAAI
LVRKQRQAKFVTEQLRARFQPTTIRLYDARSGNDANHLVLELYQILRFLERPHSPDCLKG
ALDVLGDRQKIPTQDLARLATYPEKFLYPGPLDPALSSGPAQATQTLCVQLLQARWQLPH
YQLLPFLAMTLDYSDVELATVQKLAERIAQQTQGQKNLRQSLEVFEMLLRDGFEGIELDT
DARYTRPQQITVITMHKAKGLDWDYVFIPFLHDSEIPGMSWVPSGAQFLGDYNLAQVARA
QIRHFVHGQDQGRSPTAPATITTLWQEAQQLKTEEEYRLLYVAMTRAKRLLWLSAAKQAP
FSWSTFKPHQSSLQSQKPCPIFDVLQGKI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccttagtgtgcatcaacagcaatttttaacgcaactggccgctggcctccgc
cctggtcaagatgcgttggcccaatggcggtctggagaaatggcgatcgccgccgttccc
ggttccggaaaatcccatgccctagccgttgccgctgtcctcacccttgcccggcaatct
ttgcaccacggccaacagttggtcattgtgacctttacacgagccgcagccgaggggatt
aagcaaaaaattctgacccacctcaaggccgcccagttacctgtggtgggtttttcggta
caaacgatccatggtttagccttgcaaattgccagtcgccacccggaggtttctggcgtg
gatctagatagcctttctctccaggatattcccgcaaatcaccccattctccgcgccgcc
gttgagcagtggattcaagcccatggggaacaatatgaacgtctttgtcagggggcacgc
tctgatcaggaaaaaacggagcaattgcgccgccgttttgccctcagcacagaaattttg
ccagaccttgcccatacggtgatccatgaaagtaaaagttctaatctctcgccccaggcc
gtagccaaactgggagaaaccctggacgatccctatcaatccttggcgatcgccgctggc
atttatcagaattaccaacaactgctccaggagaacaatgtccttgactacgacgatctg
gtgctaggggctatccgggtgctgcaacagccggagttacaacaatattggcagggacaa
atttacgggatttttgaagatgaggcccaggattctagccccctccaagagcaattgatt
cgcctcctggccacagctcccgaatctggagaatgtaacctcgtgcgggtgggcgatcca
aatcaggcgatcaattccacctttacccccgctgacccgttctatttcaatcgcttttgt
caggccgtagactgtgccgaaattcactacgcgggccgctctagcttgccaattatcact
gcggcgaatcagatgctccactgggccagtcacaccctttcaccgccggatcggtttgcg
tttcgctggcaagaaatttttccggtgcccaaccatgacccccaacaaaatgccaatcct
gatcccactggggcgggggtagaacgccattacccccaggatatttacgcgacggtgcaa
caacttggcgatcgcctcgaaactttattaaccgaaaatccagaccacagtgcggcgatt
ctcgtgcgcaaacaacgccaggccaaatttgtcactgagcaattaagggcgcgatttcag
ccaacaacaattcgcctttatgatgcccgcagcggtaatgatgccaaccatctggtgcta
gagctttatcaaattctgcggtttctggagcggccccactcccctgactgcctgaagggt
gccctcgatgttttaggcgatcgccaaaaaattcccacccaagatctagctcgtttagcc
acctatcccgaaaaatttctctatccaggccccctcgacccggccctctcctctggcccc
gcccaggccacccaaaccctctgtgttcaactgctccaggcccgctggcaactgccccac
taccaactactaccctttttggcgatgaccctggactatagcgatgtcgaactcgccacg
gtgcaaaaactcgccgaacgcatcgcccagcaaacccagggccaaaaaaatctacgccag
agcctcgaagtgtttgagatgctcctccgggatggttttgaaggcattgaactcgacacc
gacgcccgctacactcgcccgcagcaaattacggtgatcaccatgcacaaggcgaagggc
ttagattgggactatgtctttattccctttttgcacgactccgaaatccccggcatgagt
tgggtgcctagtggggcgcaatttctcggcgattacaacctggcgcaggtggcccgggcc
caaattcgccattttgtccatggccaagatcaggggcgatcgccaacggcaccagccacc
attacgaccctttggcaagaagcccagcagcttaaaaccgaagaagaataccgacttctg
tacgtggccatgacccgcgccaaacgactcctgtggctttctgcggccaaacaagctccc
ttttcctggagtacctttaaaccccaccaaagttcattgcagtcccagaaaccctgtcca
atttttgacgttttacaaggaaaaatttaa
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