Picosynechococcus sp. PCC 7002: SYNPCC7002_A2458
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Entry
SYNPCC7002_A2458 CDS
T00664
Symbol
groEL
Name
(GenBank) chaperonin, 60 kDa protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
syp
Picosynechococcus sp. PCC 7002
Pathway
syp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNPCC7002_A2458 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syp03019
]
SYNPCC7002_A2458 (groEL)
03110 Chaperones and folding catalysts [BR:
syp03110
]
SYNPCC7002_A2458 (groEL)
03029 Mitochondrial biogenesis [BR:
syp03029
]
SYNPCC7002_A2458 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syp04147
]
SYNPCC7002_A2458 (groEL)
Enzymes [BR:
syp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SYNPCC7002_A2458 (groEL)
Messenger RNA biogenesis [BR:
syp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SYNPCC7002_A2458 (groEL)
Chaperones and folding catalysts [BR:
syp03110
]
Heat shock proteins
HSP60 / Chaperonin
SYNPCC7002_A2458 (groEL)
Mitochondrial biogenesis [BR:
syp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SYNPCC7002_A2458 (groEL)
Exosome [BR:
syp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SYNPCC7002_A2458 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SYNPCC7002_A2458 (groEL)
Exosomal proteins of breast cancer cells
SYNPCC7002_A2458 (groEL)
Exosomal proteins of colorectal cancer cells
SYNPCC7002_A2458 (groEL)
Exosomal proteins of bladder cancer cells
SYNPCC7002_A2458 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACB00436
LinkDB
All DBs
Position
2555207..2556832
Genome browser
AA seq
541 aa
AA seq
DB search
MAKSIIYNEDARRALEKGIDLLAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHIENTGVSLIRQAASKTNDVAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGID
KATEFLVGRIKDQARPVEDSTAIAQVGAISAGNDKEVGDMIAKAMDKVGKEGVISLEEGK
SMETELEITEGMRFDKGYTSPYFVTDTERMEAVLEDPFILITDKKITLVQDLVPILEQVA
RQGKPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKQMLEDIAVLTGGQLI
TEDAGLKLDNTSVDMLGKARRITITKDNTTIVADGNEQAVKTRCEQIRRQIEESDSSYDK
EKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APELETWANDNLTAEQLTGALIVARALTAPLKRIAENAGQNGAVIAERVKEKDFNTGFNA
ATNEFVDMLAAGIVDPAKVTRSATQNAASIAGMVLTTECIVVDKPEKDKAGAAPGAGDFD
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatctattatttacaacgaagatgctcgccgcgccctcgaaaaagggatcgac
ctcctcgctgaagctgttgcggtaaccctcggccccaaaggtcggaacgttgtgctcgaa
aagaaatttggcgcaccccagatcgtgaatgacggtgtgaccattgccaaggaaatcgag
ctcgaagaccacatcgaaaacaccggtgtttctttgattcgccaagcggcttctaaaacc
aatgatgtggccggtgatggaaccaccacagcaacggttctcgcccatgccatggtcaag
gaaggtctccgcaacgtcgcggctggtgcgaaccccatcgccctcaagcgtggtattgat
aaagcgactgaattcctcgttggccgcatcaaagatcaagctcgtccggtagaagattcg
acggcgattgcccaagtcggtgccatctctgcgggtaacgacaaggaagttggtgacatg
atcgccaaagccatggacaaagtcggtaaagaaggtgtgatctccctcgaagaagggaaa
tccatggaaaccgaactcgaaatcaccgaagggatgcgtttcgacaagggttacacttcc
ccctacttcgtcaccgacaccgagcgcatggaagcggttcttgaagatcctttcatcctc
atcactgacaagaaaatcaccctggttcaagaccttgtaccgattctcgaacaggttgct
cgccaaggtaagcccctcgtaattatcgctgaagatatcgagaaagaagcccttgctacc
ctcgtggtcaaccgtctccggggtgtcctcaacgttgctgcggttaaagcgcctggtttt
ggcgatcgccgcaagcagatgctcgaagatattgctgtactcaccggtggccaactgatc
accgaagatgcgggtctcaagctcgacaacaccagcgttgatatgctcggtaaagcacgc
cgcatcaccatcaccaaggacaacaccaccattgtggccgatggtaacgagcaggcagtt
aagacccgttgtgagcagatccgccgtcaaatcgaagaatctgactcttcttatgacaaa
gaaaaactccaagagcgtctcgcgaaactctccggtggtgtcgctgtgatcaaagtcggt
gcagcaaccgaaactgagatgaaagaccgtaagcttcgtctcgaagatgcgatcaacgcg
accaaagcagccgttgaagaagggattgttcccggtggtggtacaaccctggcgcacctc
gctcccgaattagaaacttgggcgaatgataacctcactgcggagcaactcactggtgct
ttgatcgtggcccgtgccttgactgcccccctgaagcgcattgctgaaaacgctggccaa
aacggtgcggtaatcgctgagcgtgtgaaggaaaaagacttcaatactggttttaacgca
gcaactaacgaattcgtggatatgctcgctgctggtatcgttgaccccgctaaggtaacc
cgttctgcaacccagaatgcggcttctatcgctggcatggttctcaccactgagtgcatc
gttgttgacaagcctgaaaaagataaagctggtgcggctcccggtgccggtgacttcgac
tactaa
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