Picosynechococcus sp. PCC 7002: SYNPCC7002_A2542
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Entry
SYNPCC7002_A2542 CDS
T00664
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
syp
Picosynechococcus sp. PCC 7002
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syp03019
]
SYNPCC7002_A2542 (rnc)
03009 Ribosome biogenesis [BR:
syp03009
]
SYNPCC7002_A2542 (rnc)
03036 Chromosome and associated proteins [BR:
syp03036
]
SYNPCC7002_A2542 (rnc)
Enzymes [BR:
syp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SYNPCC7002_A2542 (rnc)
Messenger RNA biogenesis [BR:
syp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SYNPCC7002_A2542 (rnc)
Ribosome biogenesis [BR:
syp03009
]
Eukaryotic type
90S particles
RNase
SYNPCC7002_A2542 (rnc)
Prokaryotic type
rRNA processing factors
SYNPCC7002_A2542 (rnc)
Chromosome and associated proteins [BR:
syp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SYNPCC7002_A2542 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ACB00519
CyanoBase:
SYNPCC7002_A2542
UniProt:
B1XKP4
LinkDB
All DBs
Position
2647428..2648204
Genome browser
AA seq
258 aa
AA seq
DB search
MTSLPPFQRSPLLLQALTHRSFANEQPETIQDNERLEFLGDAVLKFIMGKLLYERYPDFQ
EGELSRLRASLENNRHQLAEFAQVLGLDQILRLGKGAEKEGARQNPEILSNTFEAVVGAY
FLDAGIEAAIAFVETLVIPVADRLVQQPSDPLAQNFKGQLQEWALANHGEIPKYKTLNES
GADHAKTFTVAVYLQGQEWGRGQAASKKQAQKAAAQVALQKLTPSSVPTEPSPKPPATDD
RFALLQALATQITPRQSP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcttgcctccctttcagcgatcgcctcttctgttacaggcgttgacccaccgc
tcctttgccaacgaacaaccagagacaatccaagacaatgagcgcctggaatttttaggc
gatgcggtgctcaagttcatcatgggaaagctactgtacgagcgttatcctgactttcaa
gaaggggaactgagccgactgcgggccagtttagaaaataatcgccaccaattggctgaa
tttgcccaggtgttgggtctcgatcagatcttgcgcctcggcaaaggggccgaaaaggaa
ggggccaggcaaaacccagaaattttaagtaatacctttgaggcggtcgtcggggcttac
tttttagatgcggggatcgaagcggcgatcgcctttgtcgaaaccttagtcattcccgtg
gccgatcgcctcgtgcaacaaccaagcgatcccctcgcccaaaatttcaaaggccaattg
caagagtgggccctagcaaaccacggtgaaattccgaaatacaaaaccctaaatgaatcc
ggggccgaccatgcaaaaacttttacggtggcggtttatctccaaggacaggaatggggc
cggggtcaagcggcctcgaagaagcaagcccaaaaagccgcagcccaggttgctttacaa
aaattaaccccttcatcagtgcccaccgagccgtctcctaaaccacctgcaacagatgat
cgttttgccctcctccaagcccttgccacccaaatcaccccgcgccaatccccttaa
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