Picosynechococcus sp. PCC 7002: SYNPCC7002_A2546
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Entry
SYNPCC7002_A2546 CDS
T00664
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
syp
Picosynechococcus sp. PCC 7002
Brite
KEGG Orthology (KO) [BR:
syp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syp03032
]
SYNPCC7002_A2546 (topA)
03400 DNA repair and recombination proteins [BR:
syp03400
]
SYNPCC7002_A2546 (topA)
Enzymes [BR:
syp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SYNPCC7002_A2546 (topA)
DNA replication proteins [BR:
syp03032
]
Prokaryotic type
DNA Topoisomerases
SYNPCC7002_A2546 (topA)
DNA repair and recombination proteins [BR:
syp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SYNPCC7002_A2546 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Wtap
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACB00523
UniProt:
B1XKP8
LinkDB
All DBs
Position
complement(2652094..2654736)
Genome browser
AA seq
880 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPKGYHVTASMGHIRDLPSSAEEIPKEQKGQPWSQLGVNVE
NNFAPLYIVPKKKKKVVTELKQALKEADELILATDEDREGESISWHLLEVLKPKVPIKRM
VFHEITQEAIQKALTNCREIDENLVHAQETRRILDRLVGYTLSPLLWRKIAKGLSAGRVQ
SVSVRLLVQRERERQAFQSANYWDLKAELLQKKSKFEAKLITLGGKKLASGSDFDAATGK
LSKGKKVVVLSQAEAIALKDRLKDQPWTVSKTEEKPSTRRPSPPFTTSTLQQEANRKLGI
SARDTMRTAQKLYEEGYITYMRTDSVHLSEQAIAAARSCVAEKYGTEYLSPKVRQYKTKS
KGAQEAHEAIRPAGNTFRTPQETGLSGRELALYDLIWKRTVACQMADARLTQLSVILKVD
DAEFRSAGKRIDFPGFFRAYVEGSDDPDAALENQEVVLPDLKEGDQPTCKKLEEVDHNTQ
PPARYTEASLVKALESKGIGRPSTYATIIGTIVDRGYVQIRDKALTPTFTAFAVTALLEE
HFPNLVDTDFTSQMEQTLDEIATGKAQWLPYLKNFYLGDDGLGTQVKVREENIDPATAKA
IAIENLPVKVKIGRFGPYIEAANGEETITASLPADLTPADLDPEQVETILKQKTEGPEQL
GTHPETGDPIYLLVGSYGPYVQLGEVTEEKKKPKRASLPKTVKPEELTLQMAVDLLALPR
LLGEHPETNKPVKVGLGRFGPYVVHDQGKEGKDYRSLKKEDNLFTIDFERAMELLAQPKR
SRGRGKTKTPLKELGKHPADNEPVNVYEGPYGIYVNHLKVNAGLPEGETVETITLEKALE
LIAEKAGSKATKKRSTTKKKTTTKKTTAKKTTSRKTKTSS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccttgtcatcgttgaatccccgaccaaagcccgtaccattcggaactatcta
ccgaagggatatcatgtgacggcatccatgggccatatccgcgatttgccctcctctgcc
gaggaaatccctaaggaacaaaaagggcagccctggtctcagcttggggtcaatgtggaa
aataacttcgcgcccctctacatcgtgccgaagaaaaagaagaaagttgtcaccgaactc
aagcaagccctcaaagaagccgatgagttaatcctggcgacggacgaagaccgcgaaggg
gaaagtattagctggcatttgctcgaagtgctcaagcccaaggtgccgattaaacggatg
gtcttccatgagattacccaagaggcgatccaaaaagctttaaccaattgccgggaaatt
gacgaaaacctcgtccatgcccaggaaacccgccggattttagaccgtttagtgggctac
actctctcgcctttactctggcgcaaaattgccaagggtctctcggcgggacgggtacaa
tcggtgtctgtacgcttgttggtgcaacgggaacgggaacggcaggcctttcaatcggct
aactattgggacctcaaggcagaattactccagaagaaatcaaaatttgaggccaagctg
atcaccctcggtggcaagaaattagcgtctgggagtgactttgatgcggccacggggaaa
ctcagcaagggtaaaaaagttgtcgttctctcccaagcagaggcgatcgccctcaaggat
cgcctaaaagatcaaccttggacggtgagcaaaaccgaggaaaaaccgagcacccgccgc
ccctcgcccccctttaccacttccactctgcaacaggaagcgaaccgcaaactcggtatt
tcggcgcgggataccatgcgcactgcccagaagctctacgaagagggctatatcacctac
atgcggacggactcggtgcacctctcggaacaggcgatcgccgcagcccgtagttgcgtt
gcagaaaaatacggcacagaatatctcagtcccaaggtgcgccaatataaaacgaaaagt
aaaggtgcccaggaagcccacgaagcgatccggcctgcgggcaatacctttcgcacgccc
caggaaaccggcctcagtggtcgagagttagccctttatgaccttatttggaaacgcact
gttgcctgtcagatggccgatgctcgtctcactcaactgtcggtcattctcaaagtcgat
gatgctgagttccgctctgctggtaaacgcattgattttccaggttttttccgggcctat
gtggaaggctctgatgatcccgatgctgccctcgaaaaccaagaagtggtgctccccgat
ctcaaggaaggagaccagcccacctgcaaaaaattagaagaagtcgatcacaatactcaa
cccccggcccgttataccgaggccagtttggtcaaagcccttgaaagcaaaggcattggt
cgccccagcacctacgccacaattatcggcaccatcgttgatcgcggttatgtgcaaatt
cgcgataaagccttaactcccacctttacggcctttgcggtgacggcccttctggaggaa
catttccccaatctggtggatacagatttcacctcccaaatggagcagaccctcgatgag
attgccaccggcaaagcccaatggttgccctatctaaaaaatttctacctcggagatgat
ggcctgggtacccaagtaaaagtgcgcgaggaaaatattgatccggccaccgcgaaggcg
atcgccatcgaaaacctccccgtgaaagtcaaaattggtcgctttggcccctacattgaa
gctgctaacggcgaagaaacaattaccgcttccctgcccgctgatttaacccccgctgac
ctcgatccggagcaggttgagacaattctcaaacaaaaaaccgaaggccccgagcaattg
gggacgcaccctgaaacaggcgatcccatctatttacttgtgggtagctatggcccctac
gttcaactgggcgaagtcaccgaagagaagaaaaagcccaagcgtgcttccctccccaaa
accgttaaaccagaagagctcaccctacagatggctgtggatctgttagcgttgccgcgc
ctattgggagaacatcccgaaaccaacaaacccgttaaagtgggtctcggtcgcttcggc
ccctatgttgtccatgaccaagggaaagaaggcaaagattaccggtctcttaaaaaagaa
gacaatctttttacgatcgattttgaacgggccatggaactattagcgcaaccaaagcgt
tcccgtggtcggggcaaaacaaagacgcccctgaaggaactggggaaacatcccgcggat
aacgaaccagtcaatgtttatgaaggcccctatggtatctacgtgaatcacctaaaagtg
aatgcaggtttgccagaaggagaaaccgtagaaacaattaccctcgaaaaggccctcgaa
ctaatcgccgaaaaagcgggtagcaaagcaaccaagaaacgttcgacgacaaaaaagaaa
acgacgacgaaaaaaacaacagcaaaaaaaaccaccagccgtaaaacaaaaacttcttca
tga
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