Synechocystis sp. PCC 6803 PCC-P: SYNPCCP_1880
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Entry
SYNPCCP_1880 CDS
T01891
Symbol
clpB
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
syq
Synechocystis sp. PCC 6803 PCC-P
Brite
KEGG Orthology (KO) [BR:
syq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syq03110
]
SYNPCCP_1880 (clpB)
Chaperones and folding catalysts [BR:
syq03110
]
Heat shock proteins
HSP100
SYNPCCP_1880 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
IstB_IS21
AAA_14
AAA_18
AAA_28
TniB
AAA_24
ATPase_2
Zeta_toxin
AAA_7
RuvB_N
RNA_helicase
Mg_chelatase
Roc
TsaE
ABC_tran
ResIII
DNA_pol3_delta2
Torsin
DUF7310
NBD_SMAX1
AAA_6
Motif
Other DBs
NCBI-ProteinID:
BAL35966
LinkDB
All DBs
Position
2060732..2063350
Genome browser
AA seq
872 aa
AA seq
DB search
MQPTDPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQNGLATSIFNKAGASIP
RVNDQVNSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQD
DRLGKNLYREIGLTENKLAEIIKQIRGTQKVTDQNPEGKYESLEKYGRDLTELAREGKLD
PVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLI
SLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNL
LKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERYE
VHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRK
ILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKET
IDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSLLREEVLES
DIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSDP
NRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYV
GYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTII
IMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELRS
IVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKGI
LRGDYKPGETIVVDETDERLSFTSLRGDLVIV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccacagatcctaataaatttacggagaaagcttgggaggcgatcgccaaaaca
ccggagattgctaaacagcatcgacaacagcaaattgagacggaacacctactcagtgcc
ctactagaacaaaatggtctggccaccagcatctttaataaggctggggcgagcattccc
cgagttaacgatcaagttaatagctttattgcccaacagccaaaattaagtaatccgagt
gaatcgatttatttaggccgcagtctcgataaattgttggacaatgcggaaatagccaag
tctaaatatggagacgactatatttccatcgagcacttgatggcggcttacggccaagat
gaccgcctgggcaaaaacttatatcgagaaattggcctaacagaaaataagttggcagaa
attatcaagcaaattagaggaacccaaaaagtgaccgatcaaaatccagagggcaaatac
gaatcccttgaaaaatatgggcgagatttaacggaattagcccgggaaggtaaactagat
cctgtcattggccgggatgaagaagtgcggcgcaccattcagatcctttcccgccgcaca
aaaaataaccctgtgttaattggggaaccgggggttggtaaaacggcgatcgccgaaggt
ttagcccaaagaattattaaccatgacgtaccggaatcattgcgggatcgcaaactaatt
tccctcgatatgggggcgttaattgccggggcaaaataccggggggaatttgaagaaaga
cttaaagcggtacttaaagaagttaccgacagccaggggcaaattattctctttattgac
gaaattcataccgttgtcggcgctggggccacccaaggagccatggatgcgggcaactta
ttgaaacccatgttagcccggggtgctttgcgttgtatcggggccaccactttagatgaa
tatcgcaaatatatcgaaaaagatgcggctttggaacgacgtttccaggaagttttagtg
gatgaacccaatgtattagataccatttccattctccggggattaaaagaacgctatgaa
gtacaccacggcgtaaaaattgccgatagtgccctggtagcggcggccatgttgtccaat
cgttacatcagtgatcgttttctgccggataaagctattgatttagtagacgaagcagcg
gccaaattaaaaatggaaatcacctccaaaccagaggaattagatgaagttgaccggaaa
attctccaactagaaatggagcgtttatctttacaacgggaaaatgattctgcttccaag
gagcggctagaaaaattggagaaagagttggctgattttaaagaagaacagtctaaactt
aatggccaatggcagtcggaaaaaacggttattgatcaaattcgtactgttaaggaaacc
atcgaccaggtgaacctagaaattcaacaggcccaacgggattacgactacaataaagca
gcggagttacagtatggcaaattaactgatttacagcggcaagtggaagctttggaaacc
caattggcggagcaacaaacctctggcaaatccctcttacgggaagaagttttagagtct
gacattgctgaaattatctcgaaatggaccggcattcccatcagtaaattggtggaatcg
gaaaaagaaaaactgctccacttggaagatgaactacacagccgagtgattggtcaggat
gaagcggtaaccgccgtagccgaagccattcaacgctcccgagctggtctttccgatcct
aatcgtcccaccgctagctttatttttctgggccccacaggggtcgggaaaactgagtta
gcgaaggctttggcgaaaaatttattcgacacggaagaagccctggtgcggattgatatg
tctgaatatatggaaaaacacgctgtttcccgtttaatgggggcccctccgggctatgtg
ggctatgaagaagggggacaattgacggaagcaattcgccgccggccctattcggtcatt
ctttttgacgagattgaaaaagcccatggggatgtgtttaacgtcatgctccaaatcctg
gatgatggccgtttaaccgatgcccaaggccatgtggtggacttcaaaaatacgattatc
attatgaccagtaacctgggctcccaatacattttggatgtggcgggggatgatagtcgt
tatgaagaaatgcggagccgagttatggatgtaatgcgggaaaacttccgcccagaattt
ctcaatcgggtggatgaaacgattattttccatggcttacaaaaatccgagttacgatcc
attgtccaaattcaaattcagtctttggctacccgtttggaggaacaaaaattaactttg
aagttaacggataaagccctagattttctggctgccgtgggctatgaccccgtttatggg
gcccgacctttaaaacgagccgtccaaaaatacctagaaacggcgatcgccaagggaatt
ttacggggggattacaaacctggtgagaccattgtggtggatgaaaccgacgaacgcctc
agttttaccagtttaaggggggatttagtcatcgtttag
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