Synechococcus sp. RCC307: SynRCC307_0255
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Entry
SynRCC307_0255 CDS
T00523
Symbol
holB
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr03030
DNA replication
syr03430
Mismatch repair
syr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SynRCC307_0255 (holB)
03430 Mismatch repair
SynRCC307_0255 (holB)
03440 Homologous recombination
SynRCC307_0255 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syr03032
]
SynRCC307_0255 (holB)
03400 DNA repair and recombination proteins [BR:
syr03400
]
SynRCC307_0255 (holB)
Enzymes [BR:
syr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SynRCC307_0255 (holB)
DNA replication proteins [BR:
syr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SynRCC307_0255 (holB)
DNA repair and recombination proteins [BR:
syr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SynRCC307_0255 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_22
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAK27158
LinkDB
All DBs
Position
253771..254703
Genome browser
AA seq
310 aa
AA seq
DB search
MSEALFAGIEGQQQALELLTAALNQQRLAPAYLFAGPDGVGRSLTARRFLEGLCAGGAQP
DPDLRRRLQQGNHPDLIWVEPTYLEKGERITATEAKERGLSKKTLPQIRLEQIREVSRFL
ARPPLDASRSMVVIEQAEAMAESAANALLKTLEEPGQGLLVLITAAPERLLATILSRCQR
IPFKPLPAHTMLQLVGGAQDDPPALVDLAAGSPGALLLWRERWAELPPELLAQLQQLPTQ
PIDALTLAREVCEALDTEQQLWLLQWWQWHLWRQQAQDNVQRRLTKLRRHLVGHVQPRLA
WEVALLDLIA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaggcgctgttcgccggaatcgaagggcagcagcaggcccttgagctgctcact
gctgctttgaatcagcagcgcctggccccggcttatctgtttgccgggcccgatggcgtg
gggcgctccttaacggcccgccgttttctcgaaggcctttgcgctggtggcgcgcagccc
gatccggacttgcgacgcaggctgcaacagggcaaccatcccgatttgatctgggtggag
cccacctatttggagaaaggcgagcgcatcacggcgacggaagccaaagagcgtggcttg
agcaagaaaaccctgccccagatccgcttggagcagatccgtgaagtcagccgttttttg
gcgcggccgcccctggatgccagccgctccatggtcgtgattgagcaggctgaggcgatg
gctgagtctgcagccaatgccctgctgaaaaccttggaggagcctggccagggcctgctt
gtgttgatcaccgcagcccccgagcgcctgttggccacgatcttgagccgttgtcagcgc
atcccctttaagccattgccggctcacacgatgctgcagctggtgggcggcgcccaagac
gatcccccggcgctggtggatttagcggctgggtcccctggcgccttgcttttgtggcgt
gagcgttgggccgaactgccgcctgagctgttggcccagctgcagcaactccccacccag
ccgatcgatgcgctcactttggcccgtgaggtgtgtgaagcgctcgacaccgagcagcag
ctctggttattgcagtggtggcaatggcacctttggcgccagcaagcccaagacaacgtg
cagcggaggctgaccaagctgcgccgccatttggttggacacgttcaaccgcggttggct
tgggaagtggccttgctggatctgatcgcctaa
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