Synechococcus sp. RCC307: SynRCC307_0788
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Entry
SynRCC307_0788 CDS
T00523
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit clpA homolog
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
syr
Synechococcus sp. RCC307
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syr03110
]
SynRCC307_0788 (clpA)
Chaperones and folding catalysts [BR:
syr03110
]
Heat shock proteins
HSP100
SynRCC307_0788 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
nSTAND3
AAA_18
AAA_14
UVR
Zeta_toxin
IstB_IS21
AAA_28
TsaE
NACHT
Torsin
AAA_23
DNA_pol3_delta2
NBD_SMAX1
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
CAK27691
UniProt:
A5GS32
LinkDB
All DBs
Position
complement(717821..720379)
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AA seq
852 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR
VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLAKVRTQVIRMLGETAEVATGGGGKGSTKTPTLDEFGSNLTQLASEGKLD
PVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIHAGEIPDILEDKRVL
TLDIGLLVAGTKYRGEFEERLKKIMDEIRGAANVILVIDEVHTLIGAGAAEGAIDAANIL
KPALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSVEDTIEILMGLRERYEA
HHRLKITDDAVVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKELDKQL
REVQKDKETAVREQDFTKAGELREKEVELREQIRGITQNRRDEASSEASESGSTSADATT
PASTTATADTIQDNSPVVNEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQ
DEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLD
MSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQL
LEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGDDAEETQYNRIRSLV
NEELKQYFRPEFLNRLDEIIVFRQLNRDEVKLIADIMLREVFNRMKEKGILLSVTEAFKE
RLVEEGYNPAYGARPLRRAVMRLLEDSLAEEFLAGRLKEGESALVDVDDDKQVVIRPGGT
TSAPQELASSSV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcgctttaccgagaaggccatcaaggtcatcatgctggcccaagaagaggcc
agacgtcttggtcacaacttcgttggcaccgagcagatcctgttgggtctgattggagaa
ggcaccggtgttgcggccaaagtcttgaagtcaatgggcgtcaacctcaaagacgctcgc
gttgaagtcgaaaaaatcattggccgaggctccggctttgtggccgttgagattccattc
accccccgcgccaaacgcgtcctcgagctctccctcgaagaagcccgtcagctcggccac
aactacatcggcactgagcacttgctgctaggcctgatccgcgaaggtgagggcgtcgcc
gcgcgcgttcttgaaaaccttggtgttgacctggcgaaggtgcgcacccaagtgatccgc
atgctcggcgaaaccgccgaagtggccaccggtggtggtggcaagggatccaccaagacc
ccaacgctcgacgagttcggcagcaacctcacccagctagccagcgaaggcaagctcgat
cccgtggttggtcgccacaacgagattgatcgtgtcattcaaatcttgggccgccgcacc
aagaacaaccctgtcttgattggtgaacctggtgtcggcaagaccgccatcgccgaaggg
ttggctcagcggatccatgctggtgaaattcccgacatcctggaagacaagcgtgttctg
acgctggacatcggcctgttggtggctggtaccaaataccggggcgaatttgaagagcgc
ctcaagaagatcatggatgagatccgtggcgcggccaacgtgatcttggtgatcgatgag
gtgcacaccttgatcggtgccggtgccgccgaaggcgccatcgatgccgccaacatcctc
aagccagcccttgcccgtggtgagctgcagtgcatcggggccaccacccttgatgaatac
cgcaagcacatcgagcgcgatgccgccctcgagcgtcgcttccaacccgtcaacgttggc
gaaccctccgttgaggacaccatcgaaattctgatgggcctgcgcgagcgctacgaagcg
caccaccgcctcaagatcaccgacgatgccgtggtggccgccgccacccttggcgatcgc
tacatctccgatcgcttcctgcccgacaaggccatcgacttaatcgatgaggctggcagc
cgcgtacgcctgctcaattccaagctgcccccagcggcgaaagagttggacaagcagctg
cgcgaggtccaaaaagacaaggagaccgccgttcgcgagcaggacttcaccaaagccggt
gagctgcgcgagaaagaggtggagctgcgcgagcagatccgcggcatcacccagaaccgc
cgcgatgaagccagcagcgaagcgtcggaatctggttctacttcggccgatgcaacgaca
cctgcctccaccaccgcaacggctgacaccattcaggacaacagccccgtggtgaatgaa
gaggacatcgcccaaatcgtggcgtcctggactggagttcctgttcagaagttgaccgaa
tccgagtcggccaagttgctgaacatggaggaaaccctccaccagcgcctcattggccaa
gacgaggctgtcaaagctgtctccaaggccatccgccgcgcccgcgtcggtctgaaaaac
cccaatcgcccgattgcgagtttcatcttctccggccccaccggtgttggtaagaccgag
ctcaccaaggccctggcgtcgtatttcttcggcagcgaagaagccatgattcgcctcgac
atgagcgaattcatggagcgccacacggtcagcaagctgatcggttcgcctcccggttat
gtgggcttcaacgagggcggccagctgaccgaagcggtgcgccgccggccctacaccgtg
gtgctcttcgacgaaatcgagaaagcacaccccgatgtgttcaacctgctgctgcagctg
ctggaagacggtcgtctgaccgactccaaaggccgcacggtggacttcaagaacaccttg
atcatcatgacctcgaacattggttcgaaagtcatcgagaaaggcggcggtggtctcggc
tttgagttcagcggcgacgacgctgaggaaactcagtacaaccgcattcgctcactggtg
aatgaagaactcaagcagtacttccgccctgagttcctcaaccgcctcgacgagatcatc
gtcttccgccagctcaaccgtgatgaggtgaagctcatcgccgacatcatgttgcgcgaa
gtcttcaaccgcatgaaagagaagggcatccttctctccgttaccgaagccttcaaagag
cgcttggtggaagagggctacaaccccgcctacggcgcccgcccgttgaggcgtgcggtg
atgcgcttgctggaagactccttggctgaagagttcctcgccggccgccttaaggaaggt
gaatccgccctggtggatgtcgacgatgacaagcaagtggtcatccgcccaggtggtacc
accagcgctccgcaggagctggccagcagcagcgtctga
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