Synechococcus sp. RCC307: SynRCC307_0888
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Entry
SynRCC307_0888 CDS
T00523
Symbol
priA
Name
(GenBank) Primosomal protein N' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SynRCC307_0888 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syr03400
]
SynRCC307_0888 (priA)
Enzymes [BR:
syr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SynRCC307_0888 (priA)
DNA repair and recombination proteins [BR:
syr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SynRCC307_0888 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
zf-CHY
Zn_ribbon_ISL3
AAA_30
DUF2288
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
CAK27791
LinkDB
All DBs
Position
complement(803844..806087)
Genome browser
AA seq
747 aa
AA seq
DB search
MFAPFPKPDVGERVSVSVWVEAGRSGRLLSYDASGVEPLQAGDLVRVKLRGQLHTGIVSA
EAADVPEGVALSPVLERLETAAVDPLWQQMLEGVAQRCHTSSFQVLKTALPNGWLGHRRQ
SGGHGRSVLVAERLQPPPPGDSPTQRQQALLDLLEAHGPKPVTQLVEQGFGRALLKTLAS
KQWIALTPTLLKDEAALVGSQVELQEEPPELSAQQQQALQQWQQQPEIRQWLLWGVTGSG
KTEVYLRCCQQVLEQGQSVLLLTPEIGLVPQLLQRCRQRFGDRVISFHSGLSDGERIKAW
RRCRQGGANVVVGTRSAIFLPMPQLGLIVLDEEHDSSYKQESPMPCYHARDVARIRMELE
GARLLFGSATPSLENWLLSQQDNAAMGLLELRDRIAARPLPPVHVVDMRQELASGHRRLL
SRPLLDRLMQLPERQEQAVVLVPRRGYSTFLSCRSCGEVVMCPHCDVSLTVHRNSRGDSW
LRCHWCDHRQEISDRCGHCGSTAFKPFGAGTQRVMDTLEQELEGVRLLRFDRDTTRGRDG
HQRLLLQFAAGEADVLVGTQMLAKGMDLPSVTLAAVLAADGQLHRPDVRAAEESLQLMLQ
LAGRAGRGERPGEVLVQTYSPDHRVIRHLIDGRYGRFLEEEASVRQGAGLVPYSRACILR
LAGPAASLTASTATTIAEAIGPQLQAAGWLVIGPAPAARSKVAGLSRWQLLLQGPANSDL
PLPPETELRKLLPRGVHLAIDPDPLEL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcgccgtttcccaaaccagacgtgggggaacgggtttcagtcagtgtttgggtg
gaggccggccgcagcggccggttgctcagttacgacgccagcggggttgaaccgcttcaa
gctggcgatttggtgcgcgtcaaactccgcggccagctgcatacaggcattgtcagcgca
gaggctgctgatgtgccagagggtgttgccttaagccctgtgctggagcggctggagacc
gccgctgttgatcccctgtggcagcagatgctcgagggggtggcgcagcgctgccacacc
tccagctttcaggtgctgaaaacagcgttgcccaatggctggcttgggcaccggcgccag
agcggcggccatgggcgcagcgtgttggtggccgagcggctgcagcctccgccccctggc
gactcacctacccaacgccagcaagcgctgctcgatctcctcgaggcccatggccccaag
cccgtcacgcaattggtggagcaaggctttggccgggccctgctgaaaaccctggccagc
aaacaatggattgcgctgacgccaacgctgctgaaagacgaggccgccctcgtgggcagc
caagttgagctgcaggaagaaccgcctgagctcagcgcgcagcagcagcaggccctgcag
caatggcagcagcaacccgagatccgccagtggttgctgtggggggtgactggatctggc
aaaaccgaggtgtacctgcgctgctgccagcaagtgctcgagcagggccaaagcgtgttg
ctgcttacccctgagatcggcctggtgcctcagctgctgcagcgctgccgccagcgcttt
ggggatcgcgtcatcagcttccactcgggcctcagcgatggtgagcgcatcaaggcgtgg
cgccgctgccgccaaggcggggccaacgtggtggtgggaacacgctcggcgatctttttg
ccgatgccccagctgggcttgatcgtgctggatgaagagcacgacagctcttacaagcag
gaatcgccgatgccctgctaccacgcccgagatgtggcccggatccgcatggaactggag
ggggcgcggctgctgtttggtagcgccaccccgagcctggagaactggttattaagccaa
caggacaacgcagccatggggctgctggagctgcgtgatcgcatcgccgcgcgccccctg
ccgccagtgcatgttgtggacatgcgccaagagctggccagcggccaccggcgcctactg
agccgccccctgctggaccggctgatgcaactgccggagcggcaggagcaggcggtggtg
ttggtgccgcgccgcggctacagcacctttttgagctgccgcagctgcggtgaggtggtg
atgtgcccccactgcgatgtgtcgctgacggtgcaccgcaacagccggggcgatagctgg
ctgcgctgccattggtgtgatcaccgccaggagatcagtgatcgctgcggccattgcgga
tccacggccttcaaacccttcggcgccgggacccagcgggtgatggacaccctcgagcaa
gagctcgaaggagtgcggctgttgcgctttgaccgcgacaccacccgcggacgcgacggc
catcaacgcctgctgctgcaatttgccgctggcgaagccgatgtgctggtaggcacgcaa
atgctggccaaaggcatggatctaccgagcgtcaccttggcggcggtgctggcggctgat
ggtcagctgcaccggcccgatgtgcgcgctgccgaggaaagcctgcagctgatgctgcaa
ctggccggccgcgctggccgcggggaacggccgggcgaggtgctggtgcagacctacagc
cctgatcaccgcgtgatccgccatctgatcgatgggcgctatgggcgctttttggaagaa
gaagcgagcgtgcgtcagggggctggactggtgccctacagccgcgcctgcatcctgcgt
ctggccggccctgccgccagcctcacagccagcaccgccaccaccatcgctgaagccatc
ggcccgcaactgcaagccgcgggctggttggtgattggccctgccccggcagctcgctcc
aaggtggccggcctcagccgctggcaattgctgctgcaaggcccagctaattccgactta
ccgctgccgccggagacagaactgcgcaagctgctgccccgcggcgtgcacttggcgatc
gatccagaccccttggagctctaa
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