Synechococcus sp. RCC307: SynRCC307_0924
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Entry
SynRCC307_0924 CDS
T00523
Name
(GenBank) Conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
syr
Synechococcus sp. RCC307
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syr02000
]
SynRCC307_0924
Transporters [BR:
syr02000
]
Other transporters
Pores ion channels [TC:
1
]
SynRCC307_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
CAK27827
UniProt:
A5GSG8
LinkDB
All DBs
Position
846462..850625
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AA seq
1387 aa
AA seq
DB search
MGRSIRRVLLPLSSAALLTLAGCSTQPRWDAEGFHNWLEKQLSAGLNHPVELGPLLGFGL
QGLEFGPTRVLPSASDGSQMSVERLTLLPDLISSVRQGSAVAQIGLGNLRMQLQRNAQGR
LWTFPQLAGQAPPRLRLKLQLLDAAQFSLDGARPWRFTGGRLDLNLASQQLRFGGAFRPK
GLGPRQTQLAMRVQNSWGRRPALDLRLQLRRLSLPALGSLAEAWPSQISSGEASGSLRLN
RQGQQWRCQGPVQLKQLRIGAFSSPQQRWRCGGTSLELKTSPWRWADRRGDAAAKILWRG
APWQRLSLQRLRVRSGASRLLAEGELRPDLELKLNSLRLDPSWLGLDGQPLVVRGQGRDG
LWQLQLEAPELNSAVGSFGLNGTVDARWGNGDPLLALDSQLELKRLNSAAPPVAIKPLKL
AIQREANALVFKGDARLDDLSPVELQGRWSAAGIKAELSVQDLPLQTLDPDLGGEFAGSL
AVEGKPNQPKVAARFSLLQPSVAGLQAPELWQGSWQPGSLRLSSASTQVVARLKDNRLQS
LQAVKGDGTISVVPSGGAYRWAARQWALAPLHLGLRGNRPLPLNGVLEGNGRLGLVPLFL
QGQASVSDPALAWIKGRQLQLSGVLRYPGFDFSAEVLPQGSGSVQLSSRGAWNGPLNLQA
EARKLQPGGVLRLLQDLRRPAAQRPDGRASDLGSFAIDTLGASLDAQIKALQQAQARLAL
ERPAKGNDGRIPLADVEGLMDADLSVKGASPSALWMRLAARGHLWLRGDDRDTALQLEPF
VAEVNGPLGTGDGSFSFAGLPLGFLALLTPVPAGLRGALRGSGNWRIGDGLPTLDLDLAL
QQATLAGQPLNLKRGRLSLDGRVLDVDLSLQGGESKNTVDLAGQVPLDPVEDGFELRASS
RGDGLVFLTALAGGQLQWQQGSIDLQLLARGTLANPIVNGFLRVGDGAFVVAGQSVEAVK
ATAFFDFQQLQLERFSARSGEGSIDGQGNLAFRQEGGEPGLNFTIKAFPIRRPDARLQVD
GSLKLQGSLRQPALGGEVKLSQGSITVSPSELSSAGGPSVPVDQAVPEASWDFQQPVVVR
GPRVESADGAAVRRRVPTFGPLSFRNLRVALGPQLRIAAPPVAEFLTGGLLTFNGPAGPD
VRISGVVKLLKGRVSLLTNVLKLDASNVNVAVFTPSLGLLPYLDVAFTTRVSDRVGGIDG
DQVVSSNELQGNFSNLDRLNLIKVIVAYSGPSDRLSLDTMTLRSQPPLPQERLVALLGGN
SLASLATGNAGTAIATLLGGSLLSPLISGFSNLFDDRVTASLYPAFLEPYAEDSRNQGRV
PSQLVLGAEVGVDLSDRFNFSVLTAPNRSDIPPEAVLRYQATDKLGVQGALDQQGRWQGQ
LQLFFRF
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggggcgatcgatccggcgtgtgcttcttcccctctcgagcgcggcgctgctgacgctt
gccggttgctcaacccagccgcgttgggatgccgagggctttcacaactggcttgaaaag
caactcagcgctggtctgaaccatcctgttgagctcggccccctgctggggtttgggctg
cagggcttggaatttgggcccacgcgcgtcttgccctccgcctcagatggctcgcagatg
tcggttgagcggctgaccctgctgccagatctgatcagcagcgtgcgccagggcagtgct
gtggcccaaatcggacttggcaatttgcgaatgcagctgcagcgcaatgcccaagggcgc
ctgtggacgttcccccaactcgccggccaagcgccgccgcggttgcgcttgaagctccag
cttcttgatgcggcgcaattcagccttgatggcgctcggccctggcgcttcaccggtggc
cgcctcgatctgaacttggccagccagcaattgcgctttggtggtgcctttcggcccaag
ggcttaggcccgcgccaaacccagctggccatgcgggtgcaaaacagctggggcaggcgg
cctgctctggatctgcgtctgcagctgcggcgcctgtccttgccagctctgggcagcctg
gcggaggcctggcctagccagatcagctctggagaggcctcgggttccttgcggctcaac
cgtcaaggccagcaatggcgctgccaagggcctgtgcagctcaagcagctccgtattggt
gcgtttagtagtccgcagcagcgttggcgctgtggcggaaccagcctggagctgaagacc
agtccctggcgctgggctgatcgccgcggtgatgcggccgccaaaatcctgtggcgtggg
gccccttggcagcgcctcagcctgcagcgcctgcgggtgcgctcaggcgcctcccgtctg
ctggccgagggcgaattacggccagatctggagctcaaactcaacagcttgcggctggat
cccagctggttggggctggacggtcagcccctggtcgttcgcggccagggcagagatggt
ctttggcagttgcagctcgaggctcctgaactcaacagtgctgttggctcctttggctta
aacggaacagtcgatgcccgctggggtaacggcgatcccttgctggcgctcgacagccaa
ctggagctgaaacggctcaatagcgcagctccgcccgtggccatcaagcccctgaagctc
gccatccagcgtgaagccaatgctttggtgttcaagggcgatgcccgtttggatgacctc
agccctgtggagctgcaagggcgttggtcagccgctggcatcaaggccgaattgagcgtc
caggatctgcccttgcagaccctcgatcccgacttgggcggtgaattcgctggcagcttg
gcggtggagggcaagcccaatcagcccaaggttgcggcccgcttcagcctgctgcaaccc
agcgttgccggcctgcaagcccctgagttgtggcagggcagctggcaacctggctccttg
cgcttgtcatcagccagcacgcaggtggtggctcgtttgaaggacaaccgtttgcagtcg
ctgcaggcggtgaaaggcgatggaaccatcagcgttgttcccagtggcggcgcctatcgc
tgggcggcgcggcagtgggctttggctccgctgcacttgggtttgcgcggtaatcgcccc
ttgccgctcaatggcgtgctcgaaggcaatggccgccttggcctcgttccgctgttcttg
caaggccaggccagcgtgagcgatccagctttggcttggatcaagggccgtcagctgcag
ctcagcggcgtgttgcgttacccgggctttgacttcagcgctgaggtgctgccccaaggc
agtggttcggtgcagttgagcagccgcggcgcctggaatggcccactgaacttgcaagcc
gaggcgcgcaagcttcagcccggtggggtcttgaggttgcttcaagacttgcggcgtcca
gcggcccaacgccccgatggtcgtgccagtgatctcggcagctttgccatcgacaccctc
ggtgccagcttggatgcccagatcaaggcgctgcagcaagcgcaggcacgcctggctctt
gagaggccagccaagggcaatgacggccgcattcctttggccgatgttgagggtctgatg
gatgccgacctcagcgttaagggtgcgtcgccatcggctctttggatgcgcctggcggcg
cgcggtcacctctggttgcgcggcgatgatcgtgatacggcgttgcagttggagccgttt
gttgccgaagtcaacggcccgcttggcaccggtgatggctcattcagttttgctggcttg
cccctcggctttttggctttgctcacgccggtgcctgcaggccttcgcggtgccctgcgc
ggcagcggcaactggcggattggtgatgggctgccaaccctcgatttggatctagcgctg
cagcaggccacgcttgctggtcagcccttgaacttgaaacgcggccggctgtccctcgat
ggacgtgtgttggatgtggatctctccctgcaggggggtgagtcgaaaaacacggttgat
ttggctggccaagtgcctttggacccggtggaggatggctttgagctgcgcgcctccagc
cgcggtgatggcttggtgttcctcaccgccttggctggtggacagctgcagtggcagcag
ggaagtatcgacctgcagttgttagcccgcggcacgctcgccaaccccatcgtcaacggc
tttctgcgggttggtgatggtgcttttgtcgtagctggtcaaagcgtcgaggccgtgaag
gccacagcgttctttgatttccagcaattgcagctggagcgtttctcggctcgctcaggg
gaaggatccatcgatgggcaaggcaacttggccttccgccaagagggcggcgaacctggc
ctgaatttcacgatcaaggctttccccatccgtaggcccgatgcacgtctgcaggtggat
ggctcgttgaagctgcaaggcagcttgcgccagccggccttgggcggtgaggtcaagctc
agtcaaggttcgatcacggtgtcccccagtgagctcagctccgctggtggaccgtcggtg
cctgtcgatcaagcggtgccggaagcctcctgggatttccagcagcccgttgtggttaga
gggccccgggtggaatcagccgatggcgctgccgtgcgccggcgggtgcccacctttggg
ccgctgagcttccgcaacttgcgcgttgccttgggccctcagctgcggattgcagcgcca
ccggtggcggaatttcttactggaggcttgctcaccttcaacggtccagcaggccctgat
gtgcgtatctccggtgtggtgaaactgctcaagggccgcgtcagcttgctgaccaatgtg
ctcaagctcgatgccagcaacgtcaacgtggccgtgtttacgccgtcgttgggcttgctc
ccctacttggatgtggcgttcaccacccgcgtctccgaccgcgtgggcggcatcgatggc
gatcaagtggtgagcagcaatgagctccagggcaacttctccaacctggatcgcctcaac
ttgatcaaggtgatcgtggcctacagcggcccatcggatcgcctctccctcgacaccatg
acgttgcgcagccaaccgccgctgccgcaggagcgcttggtggccctgttgggtggcaac
agcctggcgagcctggccacgggaaatgctggaacggccattgccacgttgctcggcggg
tcgttgctgtcgccattgatcagcggcttcagcaacctctttgatgaccgggtgactgct
tcgctgtacccagcgttcctggagccctatgccgaggactcccgcaatcaaggccgggtg
ccatcccagctggtgctgggagccgaggtcggagtggatctgagcgaccgcttcaacttc
tcggtgttaacggcaccaaatcgaagtgatattccaccggaggcggtgttgcgctatcaa
gccaccgacaaactgggtgtgcagggcgccctcgaccaacaggggcgctggcagggacag
ctgcaattgttcttccgcttctag
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